Transcript Information: S_Transcript_224570.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value7E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1719486782465
Replicate 21.0322956581956
Replicate 30.71063753716626
Condition 2: 8 Hour
Replicate 10.93909975708476
Replicate 20.82098527118263
Replicate 31.016902821522
Condition 3: 24 Hour
Replicate 10.48098826034336
Replicate 20.76932204433473
Replicate 30.78674266951738


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_224570.p1 GENE.S_Transcript_224570~~S_Transcript_224570.p1 ORF type:complete len:1090 (+),score=185.07,RVT_1|PF00078.23|9.2e-43,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|6.1e-17 S_Transcript_224570:193-3462(+)
ATGTGGATTAGGGATGACTCTATTCAAGATGCCTGGAGAAAGGGGTTCCTTGGGTCAAATGGTTTTAGATTAAAGCAGAAGTTGAAAGGGGTGAAAAGTGCACTCAAAATTTGGAATAAGGAACACTTTGGAGATGTTCAAAAGAAAATCAGAGAACTCAATGAGAAGATAAATGAGATCCAAAGTGACACACAAGGTCTCTATAATGTTGGGGAAGAAGACAAACTGATTGCTGAATTAACAGAAGTATACACTCGGGAGGCAGTTATGTTTAAGCAGAAGGCTAGGGTTAAATATCTGAAAGAAGGGGATCTAAATACCAGATTCTTTCACCTTTCCACCATAAATAGGAGGAGAAGGAACTCAATTCAGGCTATAAAGAGAGAGGATGGAAGATGGGAGGAGGACCCTATAGAGATTGGAATGGTGTTTGCAGACTATTTCCAGAACCTCTTTTCTACCTCACATCCAGAGGAGGCTGAGCTTTCAGAGCTCTATGGGGTGGCTGTTTCTGAGCAGGATAATGCTGGATTATGTGAGATACCTTTAGAGGAGGAGATTCTAGCAACAATCAGCTCGATGGGGCCTACCAAATCACCTGCCCCAGATGGTTTTCCTGCGTTATTTTATCAGAAATTCTGGGGAATTATCAAGCATGATGTGGTGAGCATGGTCCAGTCCTTCTTTATAAATGGTTTTTTGTTGAAAGAATTAAATCATACTTTCATCACCCTTATTCCCAAATCTCATAATGCCATTAGAGTCACAGATTTTAGACCTATTTCTCTTTGTAATGTGGTGTATAAGGTTGTGTCCAAAATCTTGGCAAATAGATTAAAATCCCTGCTTAATGATATTATTTGTCCGTTACAATCTGCGTTTATACATGCGAGGCTGATAACGGATAACTCTATTATGATTAATGAAATTCTCCACACAATGGCTAAGTGTCATTCTAAAGAGGGTCTTATGGCAGTGAAGGTGGATATGGCAAAGGCCTATGATAAGCTAGAGTGGGGTTTCTTGGTCAATGTTTTGAAAGCTATAGGTTTCAATGAGAGGTTTATTCATTTGATTTATCAGTGCATATCTACTGCTACTTACTCCATTTTGATCAATGGAAGACCGCATGGTTTTTATAAACCAGAAAGAGGATTGAGACAAGGAGATTCTCTATCTCCTTTCTTATTTGTGTTGGCTATGGATGCTTTTTCTAGATTGGTGCAGAGGAAACAAAGTGATGGGAAAATTAAAGGGGTTGAAATCAGCAGGGATTGTCCTCCAATCTCTCATTTGTTGTATGCAGATGACCTTGTATTGTTTGCTAGAGCAAATGAGAAGAATGCGGTGGAAATCAAGGATGCTCTTGACACCCTTGAGAGTTGGAGTGGATTAGCTGCAAATAAGGGCAAATCAGGGCTATTTTTCAGCAAGCAGACTAAGAGAGGGAATATAGCCAAAGTAAATGCCATCCTACCCTTTAGAGAGATAGATAAAGAAGCCGTTTATCTGGGGTTACCTTTCTTTAGAAAGAATTGCAAATCTAAGAGGCTCAAATTCATTAAGGAGAGGTTACAATCTAAGCTTCAAGGGTGGAAAGCTAAGAGCATGTCATATGCTGCAAGGACTACTCTAATTCAATCTGTAGCATCAGCAGTCTCGGTGTATGCTATGACTAGCAATTTGCTACCTAAGAAGCTTTGTAGTGAGATGGATGCCCTCATGAGAGACTTCTGGTGGGGTTTTGGGGAAGAGAAAAAAGGCATTTATCTTAGGGCTTGGAGGAATATTTGTAGACCTAAAGGAGAAGGCGGACTTAATATTAGAATGATGGCTGACTATAATAAAGCCTTACAAGCCAAGCTGTTTTGGCAGCTAGTGACTGGAGAAGATAAGTTGTGGGTAAATCAATGTTTGAAAAAATATTGTAGACGACATGATCCTATGTTTGTACAAGCAGACAAGGGGGATTCTTCTCAATGGAAGGAAATACTTCAAGGAAAAGAGGTAGTGGAGAAGGGTTATTGCAGATTTGTTGGCAATGGGAGGGGGATTAATATTTGGACTGAACCTTGGGTGCCATACCTAGAGGGATTCAAACCTGAAGCTAGAGAGGACGCGGAGGTGAATGCTTTTGAAGTACAAGATCTTATTGAAGGAAATTCCTGGAAGAAGGAGTTAGTTTTACAGCTATTTAAACCTCCCTCAGCAGAGGCTATTTTCAGAATTGAACTGCCTATGGACAATGTGGTAGACTCAGTAGTATGGACTAAAGAGAAGCATGGGTGTTTCACTGTGAAAAGTGCATATAGGGAAGTGATGAAGGAAAAATCCCTCCAATCTTCCGAGGTGGAAGCTTATTGGTGGAAAAAATTTTGGAAACTGAAGGTGCCTTATAGAGTCAGAATGTTAGTTTGGAGAATTCTAACTGACTCTATCCCTCTCAAAGCGGTCCTAAAAGAGAGGATTCAGGAGGTGGAGGATAGCTGCCGTTTGTGTGGTCAAGGTAGGGAGGACTTTATTCACCTGTTTACTGAGTGTCACTATTCGAAGTTGGTGTGGTTTCAGTGCCTTGGAATTAGAACTGATGCCATAGGGAAATTGAGCAGGGTGGATTGGATCAAAGCTTGCCTTAATCCTGAGAATTTTCTTAGCATTCCTAGAGAGATGGCTCAGGAGTTCTCTGACAAATCGGCTATCCTCTTGGATTGTATTTGGAGAGAGAGGAATCTTTGCATACATGAAGGCAAACAACCTGATCCCCAGTCAGTTTGCCAACAGTTTGATAGGCTGTGGAAGGAGGTATCTCAGTTAGATGTAAAGGTGGAGATAGAGAGGGGCAAGGAGTTTAACCCCTTCAAATTACCAGAAGGGGAGGTGTTTTGTGTGGATGCGACTGTTAGACAGCAGCAGGCGTGGTGTGCATGGGTCTTGCTGGAAAATCAAACTAATGTGTTGGATGTTGGGGCTGGGATAATTAATGTGGATAACGTGGCTAGGGCGGAAGCAGAAGCTATCTTGTTGGCGCTTCATTTTTGTATGGAACAGGGTATACAGGGTTGTTCAATTTATAGTGATGCGAACACCGTTATTGATCAGGCGGCTAAAGGCCCTCCTTACTCTTGGGAAGTTAGGTATGTAATGGGAGAGATTGCTAAATTATGTACTGAGTTGAATGTTAGGTTGTTTTTTTCGTTCCTAGGCTTCATAATTGGGCTGCTCATAACATGGCTTCATGGGCCTGTCATAGACAGTTTCAAGGATTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_224570.p1 GENE.S_Transcript_224570~~S_Transcript_224570.p1 ORF type:complete len:1090 (+),score=185.07,RVT_1|PF00078.23|9.2e-43,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|6.1e-17 S_Transcript_224570:193-3462(+)
MWIRDDSIQDAWRKGFLGSNGFRLKQKLKGVKSALKIWNKEHFGDVQKKIRELNEKINEIQSDTQGLYNVGEEDKLIAELTEVYTREAVMFKQKARVKYLKEGDLNTRFFHLSTINRRRRNSIQAIKREDGRWEEDPIEIGMVFADYFQNLFSTSHPEEAELSELYGVAVSEQDNAGLCEIPLEEEILATISSMGPTKSPAPDGFPALFYQKFWGIIKHDVVSMVQSFFINGFLLKELNHTFITLIPKSHNAIRVTDFRPISLCNVVYKVVSKILANRLKSLLNDIICPLQSAFIHARLITDNSIMINEILHTMAKCHSKEGLMAVKVDMAKAYDKLEWGFLVNVLKAIGFNERFIHLIYQCISTATYSILINGRPHGFYKPERGLRQGDSLSPFLFVLAMDAFSRLVQRKQSDGKIKGVEISRDCPPISHLLYADDLVLFARANEKNAVEIKDALDTLESWSGLAANKGKSGLFFSKQTKRGNIAKVNAILPFREIDKEAVYLGLPFFRKNCKSKRLKFIKERLQSKLQGWKAKSMSYAARTTLIQSVASAVSVYAMTSNLLPKKLCSEMDALMRDFWWGFGEEKKGIYLRAWRNICRPKGEGGLNIRMMADYNKALQAKLFWQLVTGEDKLWVNQCLKKYCRRHDPMFVQADKGDSSQWKEILQGKEVVEKGYCRFVGNGRGINIWTEPWVPYLEGFKPEAREDAEVNAFEVQDLIEGNSWKKELVLQLFKPPSAEAIFRIELPMDNVVDSVVWTKEKHGCFTVKSAYREVMKEKSLQSSEVEAYWWKKFWKLKVPYRVRMLVWRILTDSIPLKAVLKERIQEVEDSCRLCGQGREDFIHLFTECHYSKLVWFQCLGIRTDAIGKLSRVDWIKACLNPENFLSIPREMAQEFSDKSAILLDCIWRERNLCIHEGKQPDPQSVCQQFDRLWKEVSQLDVKVEIERGKEFNPFKLPEGEVFCVDATVRQQQAWCAWVLLENQTNVLDVGAGIINVDNVARAEAEAILLALHFCMEQGIQGCSIYSDANTVIDQAAKGPPYSWEVRYVMGEIAKLCTELNVRLFFSFLGFIIGLLITWLHGPVIDSFKDF*

Click here to download the sequence:
Link to NCBI Protein BLAST