Transcript Information: S_Transcript_224693.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value5E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10196552197387
Replicate 20.16906352151352
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.17143179034273
Replicate 30
Condition 3: 24 Hour
Replicate 10.083696871611472
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_224693.p2 GENE.S_Transcript_224693~~S_Transcript_224693.p2 ORF type:5prime_partial len:261 (-),score=31.27,RVT_1|PF00078.23|8.2e-27 S_Transcript_224693:1892-2674(-)
TCGGATGTACGCAGTCTTTCCCCTGTAAAAACAGAGAGACTGTTTCCGATTGACCCTGTAGACAACATAGTTATTGTACAAGAAATGATACATTCCATGAAGCGCAGCAAGTCAGCCACAGGTACAATGGCAATCAAAAATGACTTGGCCAAAGCCTATGATAGGCTAAGATGGAATTTTATTAATGAAACACTGATGGAAATGAGACTACCCATGCTCATGATTGGGGTTATTATGGAGTGCATCACTACCAATCGCATGAGTATCTTGTGGAACGGGGAACCTACTGATTATTTTGTCCCCTCGAGGGGTATAAGACAGGGTGACCCCTTATCTCCATACATATTCGTTATGTGCATGGAGAGGTCAACCCACATTATTGATGAGGCTGTAACACTTGGTGCATGGACACCAGTCAAAGCAAGTCGTGATGGCCCTGCAGTGCATAGCTTATTATTTGCGGACGATGTGATGCTATTTGGAGAAGCCTCAACAGCCCAAGCCCAAGCCAGGCAGTGCTTGGAGCGTTTCTGCAATGCTTCAGGTGAGAAATTAAATTTGAACAAATCTCACATCTATATCTCTCCCAACACCCCCATATCGGTTAGGGAGGGAATTTGTGGCATTTTAGAGATGGCTGAAACCGAGGATCTTGGCACTTACTTTGGTGTTCCAACCTTTCATGGCAAAGTCTCGAGGACTCAGTTTGACTATCTCTCTCAAAAAATGAACAAGAGACTAGCGGGTTGGAAAGCAAAGACTCTTTCACTTGCGGGAGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_224693.p2 GENE.S_Transcript_224693~~S_Transcript_224693.p2 ORF type:5prime_partial len:261 (-),score=31.27,RVT_1|PF00078.23|8.2e-27 S_Transcript_224693:1892-2674(-)
SDVRSLSPVKTERLFPIDPVDNIVIVQEMIHSMKRSKSATGTMAIKNDLAKAYDRLRWNFINETLMEMRLPMLMIGVIMECITTNRMSILWNGEPTDYFVPSRGIRQGDPLSPYIFVMCMERSTHIIDEAVTLGAWTPVKASRDGPAVHSLLFADDVMLFGEASTAQAQARQCLERFCNASGEKLNLNKSHIYISPNTPISVREGICGILEMAETEDLGTYFGVPTFHGKVSRTQFDYLSQKMNKRLAGWKAKTLSLAGE*

Click here to download the sequence:
Link to NCBI Protein BLAST