Transcript Information: S_Transcript_224808.p2


Annotated TAIR IDAT5G09280.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2880423-2881597 | Reverse length=297
E-Value1.8E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23975676788451
Replicate 20.39752773977504
Replicate 30.33230155105587
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.59040225650254
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_224808.p2 GENE.S_Transcript_224808~~S_Transcript_224808.p2 ORF type:complete len:111 (-),score=15.74,Pec_lyase_C|PF00544.15|5.4e-14 S_Transcript_224808:629-961(-)
ATGGGACCTGGTTCCAAGCTGATTGAACTCAGCGAGATGGATGGTGATGCCATTAGGATGATTGCATCCAAAAAGGTTTGGATAGACCACAACACCTTATATAAATCCGAGGATGGCCTCATAGACGTAACCCTTGGTTCAACCAACATCACCATCTCAAATAACTGGTTCAGGGACCATGACAAGGTCATGCTCCTCGGCCATGATGATGCATTCAAAGCTGATAGGGACATGAAGGTCACAGTTGTATACAACCGTTTTGGCCCTAACTGCAACCAGCGTATGCCAAGGTCTGCTTCTCATTCTCACATAATCTCAATACCACTAATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_224808.p2 GENE.S_Transcript_224808~~S_Transcript_224808.p2 ORF type:complete len:111 (-),score=15.74,Pec_lyase_C|PF00544.15|5.4e-14 S_Transcript_224808:629-961(-)
MGPGSKLIELSEMDGDAIRMIASKKVWIDHNTLYKSEDGLIDVTLGSTNITISNNWFRDHDKVMLLGHDDAFKADRDMKVTVVYNRFGPNCNQRMPRSASHSHIISIPLI*

Click here to download the sequence:
Link to NCBI Protein BLAST