Transcript Information: S_Transcript_224815.p2


Annotated TAIR IDAT5G09280.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2880423-2881597 | Reverse length=297
E-Value5.1E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.25699862930111
Replicate 20
Replicate 30.29672993417784


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_224815.p2 GENE.S_Transcript_224815~~S_Transcript_224815.p2 ORF type:3prime_partial len:85 (-),score=13.07 S_Transcript_224815:2-217(-)
ATGGTGGATTCGCAAGCCATGGATGATAACATCAGTAACCTTATGGAGCAAGAGGCAACCACCCCTAGAGATGTGAACACTAGCACCTCGGCCGTCAATGGTTGTAAAGTTTCCAATAACAAGGGTCCTCGCGAGGTTGATGTTCATGTCCTTTTGGAATGTGATCCATACCTTTCCAGGAATCTTGGTGACTCCATAACGAAGAGTCCCAGGCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_224815.p2 GENE.S_Transcript_224815~~S_Transcript_224815.p2 ORF type:3prime_partial len:85 (-),score=13.07 S_Transcript_224815:2-217(-)
MVDSQAMDDNISNLMEQEATTPRDVNTSTSAVNGCKVSNNKGPREVDVHVLLECDPYLSRNLGDSITKSPRL

Click here to download the sequence:
Link to NCBI Protein BLAST