Transcript Information: S_Transcript_224818.p1


Annotated TAIR IDAT1G17400.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5960920-5962245 | Reverse length=295
E-Value1.1E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9846356525436
Replicate 23.0241829923073
Replicate 32.5279762856026
Condition 2: 8 Hour
Replicate 13.7203173138924
Replicate 25.2270674391885
Replicate 34.5819111674259
Condition 3: 24 Hour
Replicate 12.4498934755807
Replicate 22.1181132314343
Replicate 31.6500402881852


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_224818.p1 GENE.S_Transcript_224818~~S_Transcript_224818.p1 ORF type:complete len:321 (+),score=74.37 S_Transcript_224818:376-1338(+)
ATGGAACAAGGCATGATGAGTTGTGAAGGATCTGTGCTTTGTGAAGGGGTCTCTTCCTCCTCTGCGAGCAGCAGCAATACTCGGACTTTGAATTCAAAGAGCTTAACATCACAGAACAATACTCTGACAATGAAGTTCTTCAACTGGATGCAAAACAAGATTAATGGAAGACCAGGGAACCAGAAACTAAATACAACCCAACTTAATAATCAACCAAAGCAACCCCCTCAGAGAGAAGAGTTCAGTGATTGGCCTCATGGGCTACTTACAATCGGGACATTTGGTAACAATGAACTCAAAGACCGATCCAATAAATCTGAAATCCAAACTGTGACTGATGAGCACGAGCAAGCGCAAGAGCAGAATCCCACCACGGCCTCATCTCCAGACTTGTCAGAGTTCACTCCAGAAGAGGTTGGAAAATTGCAGAAGGAATTGACAAAGCTCTTGAAGCGAAAACCAGCCAAACAAGAAGAGGAAAACCCTGATCTTCCTCTGGATAGATTCCTCAACTGCCCTTCGAGCCTGGAGGTCAGCCGGAGGATCTCAAACGCAGTTTGCACTGACCCTGAGTACAAGGAAGACGATATTGAGCGCACCATTAGTGTGATCATTGGCAAATGCAAAGAGGTCCGAGCAGAGAAGACTAAAAATGCAATTGGGAAGAAGTCTCTCTCTTTTCTCCTCAAAAAGGTGTTTGTTTGTGCTAATGGGTTTTCCCCTGCTCCTAGCTTGAGAGACACCCTCCAAGAGTCTAGAATGGAGAAGCTATTACGAACCATCCTTCATAAGAAGATCTACCAACAAAGTTCTTCTCGCGCATCTTCAATGAAGAGATATCTTGAAGATAAACACACGTCAAAGAAGAGAAGCAACGAAGATGAAACAGAGGAGAAGCCCAGGGCTAGTGAGGGATGTAAATGGGATAAGTCAGATTCTGAATATATTGTTCTAGAAATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_224818.p1 GENE.S_Transcript_224818~~S_Transcript_224818.p1 ORF type:complete len:321 (+),score=74.37 S_Transcript_224818:376-1338(+)
MEQGMMSCEGSVLCEGVSSSSASSSNTRTLNSKSLTSQNNTLTMKFFNWMQNKINGRPGNQKLNTTQLNNQPKQPPQREEFSDWPHGLLTIGTFGNNELKDRSNKSEIQTVTDEHEQAQEQNPTTASSPDLSEFTPEEVGKLQKELTKLLKRKPAKQEEENPDLPLDRFLNCPSSLEVSRRISNAVCTDPEYKEDDIERTISVIIGKCKEVRAEKTKNAIGKKSLSFLLKKVFVCANGFSPAPSLRDTLQESRMEKLLRTILHKKIYQQSSSRASSMKRYLEDKHTSKKRSNEDETEEKPRASEGCKWDKSDSEYIVLEI*

Click here to download the sequence:
Link to NCBI Protein BLAST