Transcript Information: S_Transcript_224889.p1


Annotated TAIR IDAT5G04885.1
Annotated Gene NameGlycosyl hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1423369-1426628 | Forward length=665
E-Value2.7E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.89134453897734
Replicate 20.73894510479715
Replicate 30.70594205104691
Condition 2: 8 Hour
Replicate 12.0407072073811
Replicate 21.8197197458151
Replicate 34.7935159685843
Condition 3: 24 Hour
Replicate 11.1497307100313
Replicate 20.54219644919491
Replicate 31.3274760213219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_224889.p1 GENE.S_Transcript_224889~~S_Transcript_224889.p1 ORF type:3prime_partial len:209 (+),score=48.98,Glyco_hydro_3|PF00933.17|1.8e-32 S_Transcript_224889:200-823(+)
ATGGCAATGGCAGAAACATACATAAAATACAGGGATCCAAATCAACCTGTAGAAGATCGAGTCAACGACCTTTTGAGCAGAATGACCTTGGAAGAGAAGATTGGCCAGATGACTCCAGTCGATCGCTCTGTCGCCTCCTCTGATGTCATGAAGAATTATGCTATTGGGAGTGTTTTGAGTGGAGGAGACAGTGCGCCATTTCCAAGGGCAAGTGCTGAAGATTGGATTAATCTGATCAACAATCTTCAAGAAGGGGCAATGTCTACTCGTCTAGGAATACCAATGATTTATGGGATTGATGCTGTCCATGGAAATGCAATTGTCTACAATGCCACAGTTTTCCCCCATAATATTGGTCTTGGAGCTGCTAGGGATCCAGAACTTATGAAAAGGATTGGTGTTGCAACTGCTCTTGAAGTTAGAGCAACAGGGATAACATATGCCTTTGCTCCCTCCATTGCTGTTTCTCGAGATCCAAGATGGGGCCGTTGCTATGAGAGTTACAGCGAGGACCCCAGGATTGTTCAGGAGATGACAGATATTATCTATGGCTTACAAGGAGAAAACCCGGAAAAATCTCAGAATGGCATTCCATATGTCCGAGGAAAGTATGCACTACATACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_224889.p1 GENE.S_Transcript_224889~~S_Transcript_224889.p1 ORF type:3prime_partial len:209 (+),score=48.98,Glyco_hydro_3|PF00933.17|1.8e-32 S_Transcript_224889:200-823(+)
MAMAETYIKYRDPNQPVEDRVNDLLSRMTLEEKIGQMTPVDRSVASSDVMKNYAIGSVLSGGDSAPFPRASAEDWINLINNLQEGAMSTRLGIPMIYGIDAVHGNAIVYNATVFPHNIGLGAARDPELMKRIGVATALEVRATGITYAFAPSIAVSRDPRWGRCYESYSEDPRIVQEMTDIIYGLQGENPEKSQNGIPYVRGKYALHT

Click here to download the sequence:
Link to NCBI Protein BLAST