Transcript Information: S_Transcript_225296.p1


Annotated TAIR IDAT1G30610.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)EMB88, EMB2279
Annotation TypeHomolog
Chromosome Positionchr1:10846676-10850517 | Forward length=1006
E-Value5E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8481250857764
Replicate 22.6046348783177
Replicate 33.0737893472668
Condition 2: 8 Hour
Replicate 13.7023247078356
Replicate 22.6411210199677
Replicate 33.848694706455
Condition 3: 24 Hour
Replicate 10.75850289897896
Replicate 21.8886509646956
Replicate 31.926683947613


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_225296.p1 GENE.S_Transcript_225296~~S_Transcript_225296.p1 ORF type:5prime_partial len:144 (-),score=27.04,PPR_2|PF13041.2|1.1e-12,PPR_2|PF13041.2|2.4e-09,PPR_2|PF13041.2|0.0059,PPR|PF01535.16|7.5e-06,PPR|PF01535.16|5.3e-09,PPR|PF01535.16|0.39,PPR_3|PF13812.2|3.7e-05,PPR_3|PF13812.2|4.7e-05,PPR_3|PF13812.2|0.57,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|5.6e-07,PPR_1|PF12854.3|1.3e+02 S_Transcript_225296:53-484(-)
GACAAGATTTGTAAGGTTGCTAGTAAGCCTCTGGTGGTGACTTACACTGGTTTAATCCAAGCCTGTGTTGACCATGGAAATGTTGATGGTGCGACATCCATATTCAACCATATGCAGAAGTATTGCTCTCCGAATTTGGTGACCTATAACATCATGCTGAAAGCTTATCTTGAACACCGGATGTTTGATGAGGCAAAAGAGCTGTTTCAAAAGATGACAGAGAGTGGGCGTGTTGGTTGTAAAATCAACGGCGGGATCACACCAGATCTTCATTCTTTTAACTTGATGCTGGAAGCATGTATCAGAGAAGAAAAATGGGATGATTTTGAATATGCCTATGAACAAATGTTGCACCAAGGGCATCCTTTCAACACAAAACGCCATCTTTGGATGGTCTTGCAAGCTTCAGGTGCTGGAAAGGTATTGTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_225296.p1 GENE.S_Transcript_225296~~S_Transcript_225296.p1 ORF type:5prime_partial len:144 (-),score=27.04,PPR_2|PF13041.2|1.1e-12,PPR_2|PF13041.2|2.4e-09,PPR_2|PF13041.2|0.0059,PPR|PF01535.16|7.5e-06,PPR|PF01535.16|5.3e-09,PPR|PF01535.16|0.39,PPR_3|PF13812.2|3.7e-05,PPR_3|PF13812.2|4.7e-05,PPR_3|PF13812.2|0.57,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|5.6e-07,PPR_1|PF12854.3|1.3e+02 S_Transcript_225296:53-484(-)
DKICKVASKPLVVTYTGLIQACVDHGNVDGATSIFNHMQKYCSPNLVTYNIMLKAYLEHRMFDEAKELFQKMTESGRVGCKINGGITPDLHSFNLMLEACIREEKWDDFEYAYEQMLHQGHPFNTKRHLWMVLQASGAGKVLY*

Click here to download the sequence:
Link to NCBI Protein BLAST