Transcript Information: S_Transcript_225298.p1


Annotated TAIR IDAT1G30610.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)EMB88, EMB2279
Annotation TypeOrtholog
Chromosome Positionchr1:10846676-10850517 | Forward length=1006
E-Value1.5E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5570207594487
Replicate 23.6267599272627
Replicate 34.0422435251727
Condition 2: 8 Hour
Replicate 15.8425726896255
Replicate 24.4437233599457
Replicate 34.8179655545506
Condition 3: 24 Hour
Replicate 12.2443373449241
Replicate 25.7435686871565
Replicate 32.073044745626


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_225298.p1 GENE.S_Transcript_225298~~S_Transcript_225298.p1 ORF type:internal len:146 (-),score=26.02,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.77,PPR|PF01535.16|0.0021,PPR|PF01535.16|11,PPR_2|PF13041.2|5e-06,PPR_2|PF13041.2|0.0059,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|2e+03,PPR_3|PF13812.2|0.00047,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|2,PPR_3|PF13812.2|1e+03,TPR_11|PF13414.2|1.5,TPR_11|PF13414.2|0.02,TPR_11|PF13414.2|0.00071,TPR_19|PF14559.2|3.7e+03,TPR_19|PF14559.2|0.0009,TPR_19|PF14559.2|4.3,TPR_14|PF13428.2|1.2e+02,TPR_14|PF13428.2|36,TPR_14|PF13428.2|0.019,TPR_14|PF13428.2|3e+02,TPR_16|PF13432.2|9.8e+03,TPR_16|PF13432.2|0.03,TPR_16|PF13432.2|0.011 S_Transcript_225298:2-436(-)
GATATTGTTGTTTACAATGCTGTCCTAAATGCTTGTGTGAAAAGAAAAGAATGGGAAGGAGCTATTTGGGTTCTGCAGAAACTGGCACAAGTGGGTCAACAGCCATCAAGCACTACATATGGACTTGCTATGGAGGTTATGTTGTCAAGTGGCAAGTACGACCTGGTCCATGAGTTTTTTAGGCAGATGCTGGAGTCTTCTGCGCCAAATGCTTTAGCATATAGAGTTCTTGTTAATACTCTTTGGAGAGAAGGTAAACCGGATGAGGCAATTGAAGCTGTTCAGGATATGGAAAGTCGGGGCATAATAGGTTCTGCCAGTCTTTATTATGACCTTGCTAGATGTCTCTGTAGTTTCGGAAGGTGTGACGAGGCTTTGATGCAGGTACATCGTAACGCTCATAGCTCTTGTCCTACCTTAATGCATATAGTAGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_225298.p1 GENE.S_Transcript_225298~~S_Transcript_225298.p1 ORF type:internal len:146 (-),score=26.02,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.77,PPR|PF01535.16|0.0021,PPR|PF01535.16|11,PPR_2|PF13041.2|5e-06,PPR_2|PF13041.2|0.0059,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|2e+03,PPR_3|PF13812.2|0.00047,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|2,PPR_3|PF13812.2|1e+03,TPR_11|PF13414.2|1.5,TPR_11|PF13414.2|0.02,TPR_11|PF13414.2|0.00071,TPR_19|PF14559.2|3.7e+03,TPR_19|PF14559.2|0.0009,TPR_19|PF14559.2|4.3,TPR_14|PF13428.2|1.2e+02,TPR_14|PF13428.2|36,TPR_14|PF13428.2|0.019,TPR_14|PF13428.2|3e+02,TPR_16|PF13432.2|9.8e+03,TPR_16|PF13432.2|0.03,TPR_16|PF13432.2|0.011 S_Transcript_225298:2-436(-)
DIVVYNAVLNACVKRKEWEGAIWVLQKLAQVGQQPSSTTYGLAMEVMLSSGKYDLVHEFFRQMLESSAPNALAYRVLVNTLWREGKPDEAIEAVQDMESRGIIGSASLYYDLARCLCSFGRCDEALMQVHRNAHSSCPTLMHIVA

Click here to download the sequence:
Link to NCBI Protein BLAST