Transcript Information: S_Transcript_225349.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57027859789672
Replicate 20.63036541592899
Replicate 30.39520148750573
Condition 2: 8 Hour
Replicate 10.15232421655095
Replicate 20.47939675656557
Replicate 30.45676816296389
Condition 3: 24 Hour
Replicate 10.78017441037836
Replicate 20.48565310520744
Replicate 30.72062984014617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_225349.p1 GENE.S_Transcript_225349~~S_Transcript_225349.p1 ORF type:5prime_partial len:140 (-),score=12.88,zf-RVT|PF13966.2|7.9e-06,zf-RVT|PF13966.2|2.3e+03 S_Transcript_225349:51-470(-)
CAACGTAGGCGTCTGTGGTGGTGTCTCTCTCCTGATGTTTGTGTGATGTGTGGGGTTAGTGGTGAGTCAGCTTCTCATTTATTTTTGCATTGCAAGCTGGCAAGGGCTCTTTGGGGTAAGCTCTTTGATGTAAAAGGGGAATTGATGGTGTGTCCCGCGACGGTCCTCGATTTTTTGCAGATTCGTCATGGGGGTTTCGGGAGGGATAAGGACCTGCGGGTCCTTTGGAGAAACGCTATGTTAGCTGTGTTGTGGTGCATATGGTTGGAACGTAATGCTAGGATGTTTTCCAACACTTCTCTATCGCTGGATCTACTTTGGGAGCGGATCACCTTCTTGGCTAACTTGTGGAGTAAGGCGGTTGGGGCTTTTCGAATGTATGCTATTAGTGGGGTCCAACATAATTGGGCCTCCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_225349.p1 GENE.S_Transcript_225349~~S_Transcript_225349.p1 ORF type:5prime_partial len:140 (-),score=12.88,zf-RVT|PF13966.2|7.9e-06,zf-RVT|PF13966.2|2.3e+03 S_Transcript_225349:51-470(-)
QRRRLWWCLSPDVCVMCGVSGESASHLFLHCKLARALWGKLFDVKGELMVCPATVLDFLQIRHGGFGRDKDLRVLWRNAMLAVLWCIWLERNARMFSNTSLSLDLLWERITFLANLWSKAVGAFRMYAISGVQHNWASL*

Click here to download the sequence:
Link to NCBI Protein BLAST