Transcript Information: S_Transcript_225456.p1


Annotated TAIR IDAT1G21720.1
Annotated Gene Nameproteasome beta subunit C1
Annotated Gene Symbol(s)PBC1
Annotation TypeOrtholog
Chromosome Positionchr1:7626394-7628070 | Forward length=204
E-Value7.4E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42924195540614
Replicate 20.71170288895209
Replicate 31.8839354063893
Condition 2: 8 Hour
Replicate 11.490484269477
Replicate 20.36083626838269
Replicate 31.6044186369341
Condition 3: 24 Hour
Replicate 11.1744561016449
Replicate 21.5840298413576
Replicate 31.491626282023


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_225456.p1 GENE.S_Transcript_225456~~S_Transcript_225456.p1 ORF type:complete len:186 (+),score=26.94,Proteasome|PF00227.22|6.3e-35 S_Transcript_225456:79-636(+)
ATGTCTATCTTCGAGTACAATGGGAGTGCCCTAGTGGCAATGGTAGGCAAGAACTGCTTCGCAATCGGTAGTGATCGGAGATTAGGAGTTCAACTTCAAACAATCGCGACTGATTTTCAGAAGATTTTCAAGATTCACGATCGTCTTTTTCTTGGTCTCTCTGGTCTCGGAACCGATGCTCAAACTCTGTATCAGAGGCTTGTGTTTCGACACAAATTGTATGAATTGAGGGAGGAGAGAGACATGAAGCCTGAAACTTTTGCTAACCTTGTGTCTGCTCTTTTGTACGAGAAAAGATTTGGCCCGTATTTCTGCCAGCCAGTAATTGCTGGATTAAGCGATGAAAACAAGCCATACATTTGCACTATGGATTCAATTGGAGCCAAGGAACTAGCAAAAGATTTTGTGGTTGCTGGAACCGCATCAGAATCTCTTTATGGTGCTTGTGAGGCTATGTACAAGCCTGATATGGTTTGTTCTTTCTTTGCTTTTGCTATGGGATTTATATTGATCTCCAAATTATGTGGCATCTACCCTGATATTGAATTATTCCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_225456.p1 GENE.S_Transcript_225456~~S_Transcript_225456.p1 ORF type:complete len:186 (+),score=26.94,Proteasome|PF00227.22|6.3e-35 S_Transcript_225456:79-636(+)
MSIFEYNGSALVAMVGKNCFAIGSDRRLGVQLQTIATDFQKIFKIHDRLFLGLSGLGTDAQTLYQRLVFRHKLYELREERDMKPETFANLVSALLYEKRFGPYFCQPVIAGLSDENKPYICTMDSIGAKELAKDFVVAGTASESLYGACEAMYKPDMVCSFFAFAMGFILISKLCGIYPDIELFL*

Click here to download the sequence:
Link to NCBI Protein BLAST