Transcript Information: S_Transcript_225459.p1


Annotated TAIR IDAT1G21720.1
Annotated Gene Nameproteasome beta subunit C1
Annotated Gene Symbol(s)PBC1
Annotation TypeOrtholog
Chromosome Positionchr1:7626394-7628070 | Forward length=204
E-Value4.6E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1140.33489919624
Replicate 2136.78929525659
Replicate 3121.1822707542
Condition 2: 8 Hour
Replicate 1174.5561217178
Replicate 2167.29777543757
Replicate 3164.18401643056
Condition 3: 24 Hour
Replicate 1131.92178420173
Replicate 2140.07341105967
Replicate 3128.94001237347


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_225459.p1 GENE.S_Transcript_225459~~S_Transcript_225459.p1 ORF type:complete len:205 (+),score=39.03,Proteasome|PF00227.22|1.9e-43 S_Transcript_225459:79-693(+)
ATGTCTATCTTCGAGTACAATGGGAGTGCCCTAGTGGCAATGGTAGGCAAGAACTGCTTCGCAATCGGTAGTGATCGGAGATTAGGAGTTCAACTTCAAACAATCGCGACTGATTTTCAGAAGATTTTCAAGATTCACGATCGTCTTTTTCTTGGTCTCTCTGGTCTCGGAACCGATGCTCAAACTCTGTATCAGAGGCTTGTGTTTCGACACAAATTGTATGAATTGAGGGAGGAGAGAGACATGAAGCCTGAAACTTTTGCTAACCTTGTGTCTGCTCTTTTGTACGAGAAAAGATTTGGCCCGTATTTCTGCCAGCCAGTAATTGCTGGATTAAGCGATGAAAACAAGCCATACATTTGCACTATGGATTCAATTGGAGCCAAGGAACTAGCAAAAGATTTTGTGGTTGCTGGAACCGCATCAGAATCTCTTTATGGTGCTTGTGAGGCTATGTACAAGCCTGATATGGAAGCAGAGGATTTGTTTGAGACAGTTTCCCAGGCATTGCTTGCTTCAGTCGATAGGGACTGTTTGAGTGGTTGGGGAGGCCATGTCTATCTTGTTACATCAACAGAGATCAAGGAGAGAATCTTAAAGGGCAGGATGGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_225459.p1 GENE.S_Transcript_225459~~S_Transcript_225459.p1 ORF type:complete len:205 (+),score=39.03,Proteasome|PF00227.22|1.9e-43 S_Transcript_225459:79-693(+)
MSIFEYNGSALVAMVGKNCFAIGSDRRLGVQLQTIATDFQKIFKIHDRLFLGLSGLGTDAQTLYQRLVFRHKLYELREERDMKPETFANLVSALLYEKRFGPYFCQPVIAGLSDENKPYICTMDSIGAKELAKDFVVAGTASESLYGACEAMYKPDMEAEDLFETVSQALLASVDRDCLSGWGGHVYLVTSTEIKERILKGRMD*

Click here to download the sequence:
Link to NCBI Protein BLAST