Transcript Information: S_Transcript_225811.p1


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value6E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47523216491394
Replicate 20.19698919247781
Replicate 30.49400185938216
Condition 2: 8 Hour
Replicate 10.95202635344344
Replicate 20.99874324284494
Replicate 31.9032006790162
Condition 3: 24 Hour
Replicate 10.39008720518918
Replicate 20.80942184201241
Replicate 32.2519682504568


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_225811.p1 GENE.S_Transcript_225811~~S_Transcript_225811.p1 ORF type:complete len:112 (+),score=1.60,PIF1|PF05970.10|6.2e-19 S_Transcript_225811:155-490(+)
ATGGTGAAGCTGGTGAGAATGAGGATGGCATGGCTGAATTTTAGGTTCCGAAATGATTTACTAATAAGTTCCAGTATTGAAAATCTAATCACTACCATCGTTGAGAATACCTATCCGAACTTATTGGATAATTTGAATGATTCAATTTATTTTCAACAAAGGACGACATTAGGCCCAACTAATGAGGTTGTTGACAATATTAACTTATATATGTTGTCGTTATTGCCCGATGAAGAACGATTATATAGAAGTTGTGATCAAGTATGTCCCGATGATGCTCAAAACTATTCAGATGATGAGGTATACTCAATGGAGCACCTAAATATTTTACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_225811.p1 GENE.S_Transcript_225811~~S_Transcript_225811.p1 ORF type:complete len:112 (+),score=1.60,PIF1|PF05970.10|6.2e-19 S_Transcript_225811:155-490(+)
MVKLVRMRMAWLNFRFRNDLLISSSIENLITTIVENTYPNLLDNLNDSIYFQQRTTLGPTNEVVDNINLYMLSLLPDEERLYRSCDQVCPDDAQNYSDDEVYSMEHLNILQ*

Click here to download the sequence:
Link to NCBI Protein BLAST