Transcript Information: S_Transcript_226162.p1


Annotated TAIR IDAT5G12210.1
Annotated Gene NameRAB geranylgeranyl transferase beta subunit 1
Annotated Gene Symbol(s)AtRGTB1, RGTB1
Annotation TypeOrtholog
Chromosome Positionchr5:3947254-3949595 | Forward length=321
E-Value1.9E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0774804988173
Replicate 25.5156973893787
Replicate 37.0373598213739
Condition 2: 8 Hour
Replicate 15.3313475792832
Replicate 26.1816950188718
Replicate 35.7496694197647
Condition 3: 24 Hour
Replicate 15.6049372114024
Replicate 26.5605770352584
Replicate 36.305511101279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_226162.p1 GENE.S_Transcript_226162~~S_Transcript_226162.p1 ORF type:complete len:152 (-),score=26.33,Prenyltrans|PF00432.17|70,Prenyltrans|PF00432.17|1.3e-12,Prenyltrans|PF00432.17|7.2e-13 S_Transcript_226162:39-494(-)
ATGGGGGATTTGGGAGCACACCTGGTGGGGAGTCTCATGCAGGACAGAGTATTATTTTGCTGTGTGGGTGCCCTTGCCATAACGGGTTCTCTTCACCATGTTGACAAGGACCTTCTGGGTTGGTGGTTGTGTGAGCGTCAAGTCAAATCAGGTGGTCTAAATGGTCGACCAGAAAAGCTTCCAGATGTCTGCTACTCATGGTGGGTGCTTTCTAGCCTGATTATGATCGATAGAGTTCACTGGATTGACAGAGAGAAGCTTGTGAAATTCATATTAGACTGTCAGGACTTGGAGAAAGGAGGAATCTCAGACAGGCCAGATGATGCTGTCGATGTTTTTCACACCTACTTCGGAGTTGCTGGTCTCTCACTTCTACAGTATCCCGGAGTGACAGCCATAGATCCTGCCTATGCTTTACCAGTGGATGTGGTGAACAGGATACTGCTCAGATCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_226162.p1 GENE.S_Transcript_226162~~S_Transcript_226162.p1 ORF type:complete len:152 (-),score=26.33,Prenyltrans|PF00432.17|70,Prenyltrans|PF00432.17|1.3e-12,Prenyltrans|PF00432.17|7.2e-13 S_Transcript_226162:39-494(-)
MGDLGAHLVGSLMQDRVLFCCVGALAITGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIDREKLVKFILDCQDLEKGGISDRPDDAVDVFHTYFGVAGLSLLQYPGVTAIDPAYALPVDVVNRILLRS*

Click here to download the sequence:
Link to NCBI Protein BLAST