Transcript Information: S_Transcript_226162.p2


Annotated TAIR IDAT5G12210.1
Annotated Gene NameRAB geranylgeranyl transferase beta subunit 1
Annotated Gene Symbol(s)AtRGTB1, RGTB1
Annotation TypeOrtholog
Chromosome Positionchr5:3947254-3949595 | Forward length=321
E-Value2.9E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.439603770028
Replicate 218.862842980471
Replicate 317.738814859036
Condition 2: 8 Hour
Replicate 118.72076249214
Replicate 222.371848639727
Replicate 318.712385302083
Condition 3: 24 Hour
Replicate 119.010051281891
Replicate 216.781600938211
Replicate 319.253469011539


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_226162.p2 GENE.S_Transcript_226162~~S_Transcript_226162.p2 ORF type:complete len:131 (-),score=33.22,Prenyltrans|PF00432.17|3e+02,Prenyltrans|PF00432.17|2e-10 S_Transcript_226162:721-1113(-)
ATGGTGGAGTTGGCTTCAGATAAGCATGTCAAGTATATACTAGCTATCGAAAAGAAGAAGGATGGGTTTGAATCGGTGGTCATGGAGCATCTTAGAATGAATGGTGCTTATTGGGGATTGACAACTCTGGATCTTTTGGGGAAGCTTCATGTTGTGGATCAAGATGAAGTTATATCATGGGTTATGGAGTGTCAACATGAATCTGGTGGATTTGGTGGTAATATTGGGCTTGATCCACATATTCTTTACACTCTCAGTGCAGTTCAAGTTTTAGCTCTTTTTGACAAGATAAATATTCTTGACATTGACAAGGTGTCAAGTTGTATCCTTTCCGCCTTATATGTTTGCAAAATTTCCCATCCTGTTCAATGTTTAAGGAGGCCTTCTCCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_226162.p2 GENE.S_Transcript_226162~~S_Transcript_226162.p2 ORF type:complete len:131 (-),score=33.22,Prenyltrans|PF00432.17|3e+02,Prenyltrans|PF00432.17|2e-10 S_Transcript_226162:721-1113(-)
MVELASDKHVKYILAIEKKKDGFESVVMEHLRMNGAYWGLTTLDLLGKLHVVDQDEVISWVMECQHESGGFGGNIGLDPHILYTLSAVQVLALFDKINILDIDKVSSCILSALYVCKISHPVQCLRRPSP*

Click here to download the sequence:
Link to NCBI Protein BLAST