Transcript Information: S_Transcript_226247.p1


Annotated TAIR IDAT5G26230.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9173517-9174542 | Reverse length=341
E-Value6.2E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9096881350464
Replicate 22.2356960084948
Replicate 31.9180445526945
Condition 2: 8 Hour
Replicate 15.9711092887972
Replicate 27.5169411429481
Replicate 36.7073867130341
Condition 3: 24 Hour
Replicate 11.5145785886812
Replicate 21.390047110016
Replicate 31.8832459822487


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_226247.p1 GENE.S_Transcript_226247~~S_Transcript_226247.p1 ORF type:complete len:375 (+),score=56.69 S_Transcript_226247:161-1285(+)
ATGGGGAAGGCAAAAACAGAGAGATCATCAAACAGATCAAAAACCCTGCCATCATCTCCAACTCATTCCTTCTCATCGTCTTCTTCCTCCGATTTCGAGTTCCGAATCTCAATCTCTCCTCGCAAGTCCTCAGCCTCGCTTTGCCCCGCCGACGAGCTCTTCTACAAGGGTCAGCTCCTGCCTCTCCAACTCTCGCCTCGAATCTCCTTGGTCAGGAACCTCTTAGCCTCGTCCTCCACGTCATCCTCCGCCACCGCCACCAGTACCTCCGCCTCCCGTGACTCCTCCTCCTCGACGGATTCCACCTCGTCGTCTTTCGCTGCTGATCTGTCTCTTCTCGCCGCCGGTGACCCTTGCTGCGACTCCTCCCGCCCTAGCTCCGTCACCGACGAAGACCACCTCCTCCATCCTGCTGCCAAGAGAGAACCCAAATCTACTTCGTTCAAGTACTTCTCCTCGTTTTCTAGAATCTTCAAGAAAGATCCTCCCAAACATCAGAATCAAAATCACAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAGATGAGCGTGACGGCGAAGGAGGTGATCCGGAAGTACTTGAAGAAAGTGAAGCCGCTGTACGAGAAGCTGTCCCAAAAACAAGCTGAGAGACAGAGGATTGTTATTAACGGTGGTGCTGGTGGCGGTGGACCCGTGATGCCAGCTAGGACGGGTTCGGGTTCGGGTGTGGAGAGATCCGATCCGGAGGTGATTAGGAGAGAGAGTAGTTTGGGTAGCAATATCAATAACATTAATAATGGGACGTTTTCGGGGAATCTCAAGTACTGTCCGAGAATGATGAGGAGAAGCTACGTGGCGAGCTGTCCGTCGTCGATGAGGTCATCGCCGAGTCATTCCGGGGTGTTGAACCGGGCTGGGCTTCCGGTTCGGACCGGTGGTGCTGGAGCTGGGTCGAGTTCTTCTTCATCGTCGTCGTCTTCGGAGACTTCTACCATGGAAGAGCTTCAGAATGCGATCCAAGGGGCTATTGCTCATTGCAAGAACTCCATGCTTCAGCAGAATAGCTCAAGTTTTAGTCACACCAGTACTTGTGTTATCATCGGCAAAGGCAAGGCTAAGGAGATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_226247.p1 GENE.S_Transcript_226247~~S_Transcript_226247.p1 ORF type:complete len:375 (+),score=56.69 S_Transcript_226247:161-1285(+)
MGKAKTERSSNRSKTLPSSPTHSFSSSSSSDFEFRISISPRKSSASLCPADELFYKGQLLPLQLSPRISLVRNLLASSSTSSSATATSTSASRDSSSSTDSTSSSFAADLSLLAAGDPCCDSSRPSSVTDEDHLLHPAAKREPKSTSFKYFSSFSRIFKKDPPKHQNQNHNNNNNNNNNNNNNNNKMSVTAKEVIRKYLKKVKPLYEKLSQKQAERQRIVINGGAGGGGPVMPARTGSGSGVERSDPEVIRRESSLGSNINNINNGTFSGNLKYCPRMMRRSYVASCPSSMRSSPSHSGVLNRAGLPVRTGGAGAGSSSSSSSSSSETSTMEELQNAIQGAIAHCKNSMLQQNSSSFSHTSTCVIIGKGKAKEI*

Click here to download the sequence:
Link to NCBI Protein BLAST