Transcript Information: S_Transcript_226275.p1


Annotated TAIR IDAT2G05100.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.1
Annotated Gene Symbol(s)LHCB2.1, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1823449-1824331 | Reverse length=265
E-Value1.7E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.13963790859187
Replicate 30
Condition 2: 8 Hour
Replicate 10.26994164958396
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.28688369083984
Replicate 30.15963319243744


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_226275.p1 GENE.S_Transcript_226275~~S_Transcript_226275.p1 ORF type:internal len:158 (+),score=-14.40,Chloroa_b-bind|PF00504.17|1.8e-22 S_Transcript_226275:1-471(+)
GCTCACTCTTCGTTTCACGTAGCTTCAACCTCCCCAAATTCTCAAGATGCAGGCTTCCTTCATGGGCTCCACCAAGGGCCTCAAGGCCAATGTTGGCGCGGGCAACTCCACCCGCATGGCGGCGGTGATGCGCCGCACGACCAACGGCAAGAAGAATGCTTCTGCTCCGCCTCCGTCTGGTACGGCCCCGACCGCCCCAAGTTCCTCGGCCCCTTCTCCGAGGACGCCACCCCGCCTTACCTCAACGGTGAGTTCCCGGGTGACTATGGCTGGGACACCGCGGGTCTGTCTGCGGACCCTGAGACGTTCCGCCGCTACCGCGAGCTCGAGGTCATCCACGCGCGCTGGGCCATGCTCGGCGCGCTGGGCTGCGTGACGACCGAGATCTTGCAGCGCAACGGCACCCCGATCGAGGGCGTGTGGTTCAAGGCGGGCGCGTCGATCTTCAAGAGCGATGGCCTCAACTACCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_226275.p1 GENE.S_Transcript_226275~~S_Transcript_226275.p1 ORF type:internal len:158 (+),score=-14.40,Chloroa_b-bind|PF00504.17|1.8e-22 S_Transcript_226275:1-471(+)
AHSSFHVASTSPNSQDAGFLHGLHQGPQGQCWRGQLHPHGGGDAPHDQRQEECFCSASVWYGPDRPKFLGPFSEDATPPYLNGEFPGDYGWDTAGLSADPETFRRYRELEVIHARWAMLGALGCVTTEILQRNGTPIEGVWFKAGASIFKSDGLNYP

Click here to download the sequence:
Link to NCBI Protein BLAST