Transcript Information: S_Transcript_226280.p1


Annotated TAIR IDAT5G01530.1
Annotated Gene Namelight harvesting complex photosystem II
Annotated Gene Symbol(s)LHCB4.1
Annotation TypeHomolog
Chromosome Positionchr5:209084-210243 | Forward length=290
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19568383261162
Replicate 20.16222639380526
Replicate 30.13560835355589
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.33329134671099
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_226280.p1 GENE.S_Transcript_226280~~S_Transcript_226280.p1 ORF type:internal len:136 (+),score=-25.68,Chloroa_b-bind|PF00504.17|2e-16 S_Transcript_226280:2-406(+)
TCTGACACCTTGCTTTCTAACTTCTTGTCACAGCCGGACACGATGCTGCAGTCCGCCGTCGCACAGCGCTGCGCCCGCGTTGCCCGCCTTGCGGTCTGCAGGCGCGCTTCGGACGTCGGACGTCGAAGCGGTCGAAAGACCGCATGTCAAGCTGTCGGGACAGAGGACACGTACGGCGGGCGTGAATATGCGCGCGCGCTGCCGGGCCAGTGCGCGCCCTTCGGCTACTTCGACCCGCTCGGCCTCGCGGCGGAGACGACGCCGGAGCAGGTGAAGCGGTACCGCGAGGCGGAGCTCACGCACGGCCGCGTCTGCATGCTCGCCGCCCTCGGCTTCCTCGTCGGCGAGGCGGTGCAGGACAAGACCCTCTTCTACAACTGGGACGGCAACATCACGGGCCCAGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_226280.p1 GENE.S_Transcript_226280~~S_Transcript_226280.p1 ORF type:internal len:136 (+),score=-25.68,Chloroa_b-bind|PF00504.17|2e-16 S_Transcript_226280:2-406(+)
SDTLLSNFLSQPDTMLQSAVAQRCARVARLAVCRRASDVGRRSGRKTACQAVGTEDTYGGREYARALPGQCAPFGYFDPLGLAAETTPEQVKRYREAELTHGRVCMLAALGFLVGEAVQDKTLFYNWDGNITGPA

Click here to download the sequence:
Link to NCBI Protein BLAST