Transcript Information: S_Transcript_226281.p1


Annotated TAIR IDAT2G05070.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.2
Annotated Gene Symbol(s)LHCB2.2, LHCB2
Annotation TypeHomolog
Chromosome Positionchr2:1799436-1800329 | Reverse length=265
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78273533044649
Replicate 21.4832127433623
Replicate 30.3874524387311
Condition 2: 8 Hour
Replicate 10.26880744097226
Replicate 20
Replicate 30.35824953957952
Condition 3: 24 Hour
Replicate 10
Replicate 21.6188436840248
Replicate 30.63584985895251


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_226281.p1 GENE.S_Transcript_226281~~S_Transcript_226281.p1 ORF type:5prime_partial len:238 (+),score=-13.21,Chloroa_b-bind|PF00504.17|3.2e-39 S_Transcript_226281:1-714(+)
CGCACATATCTGTTTGACAACTCTAGCTTCAACCTACGAAAACTACACAAGATGATGATGCCAAGCACCGCAACTCGCCCAGCCGTCCTGGCTGCGGTCCCACGCAGTGCAGTGCGCGCGCAACGGCGTGGTGCAGCCTGCAACGCCGTCAACGCCGGTGGCGAAGAATATGCGCGCACACTGCCCGGCATCACGGCCCCCACCGGCTACTTCGACCCCCTGGCCCTTGCCTCCAAGACCACCCCTGAGCAGGTGAAGCGGTACCGCGAGGCGGAGCTCACGCACGGCCGCGTCTGCATGCTCGCGGCGCTCGGCTTTCTCGCCGGCGAGGCCGCGCAGGGCAAGAAGCTCTTCTTCAACTGGGACGACAAGATCGGCGGCCCCGCCATCGTGCACTTCCAGCAGACGCGCCAGGGCTTCTGGGAGCCGCTTGTGCTCGCGATCGGCATCGCCGAGGCGTGGCGCATTGGCCGCGGCTGGGCTGAGCCCGTCGAGAATGGCGTGTTCACGCTGCGCAGTGACTACGTGCCCGGCGACCTTGCCTTCGACCCGCTCGGCATCTGCCCCAAGGACCAGCAGGAGTTCGATGTCATGCGCACGAAGGAGCTGAACAACGGCCGCCTTGCGATGATTGCGGTTGCCGGCTTTGTGGCACAGGAGGAGGTGAACTTCGACAAGATCATCCCTACCTTCAAGCGGTGGATCGGCCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_226281.p1 GENE.S_Transcript_226281~~S_Transcript_226281.p1 ORF type:5prime_partial len:238 (+),score=-13.21,Chloroa_b-bind|PF00504.17|3.2e-39 S_Transcript_226281:1-714(+)
RTYLFDNSSFNLRKLHKMMMPSTATRPAVLAAVPRSAVRAQRRGAACNAVNAGGEEYARTLPGITAPTGYFDPLALASKTTPEQVKRYREAELTHGRVCMLAALGFLAGEAAQGKKLFFNWDDKIGGPAIVHFQQTRQGFWEPLVLAIGIAEAWRIGRGWAEPVENGVFTLRSDYVPGDLAFDPLGICPKDQQEFDVMRTKELNNGRLAMIAVAGFVAQEEVNFDKIIPTFKRWIGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST