Transcript Information: S_Transcript_226285.p3


Annotated TAIR IDAT5G48310.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19574961-19580362 | Reverse length=1156
E-Value1E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23141740204505
Replicate 20.57555103193517
Replicate 30.16037161811827
Condition 2: 8 Hour
Replicate 10.18543817667072
Replicate 20.58361344277548
Replicate 30.18535519656506
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.21932212526188


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_226285.p3 GENE.S_Transcript_226285~~S_Transcript_226285.p3 ORF type:complete len:115 (+),score=20.44 S_Transcript_226285:1565-1909(+)
ATGCAAGCAGGGACAGAGTATGTTCGACAGGTTTCATCAATTGTGAAGAGTGGCATCAATTCATTGGTGAACTCATCATCGCCAGTGACATATGAAGACAAACTTTCATGCTTGTTCCTCATGAAGAGCTCCATAGAGGATGTTCAAATGGATTATGGTTCTGCTATATGCTTACATCCAGGAACTGGAGATTACCATGACTTCTTTCCCGAAAGTCAAGGGGATAAACTTCTGATAGAAGTTCAAGATGCAAAACAAATTACCCACGGTCAAGCTGTAATCCCATTTTCGATGATAGCTGAGAATCCTGTATGTAGTTTCTTACCCAATTTGAGATGGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_226285.p3 GENE.S_Transcript_226285~~S_Transcript_226285.p3 ORF type:complete len:115 (+),score=20.44 S_Transcript_226285:1565-1909(+)
MQAGTEYVRQVSSIVKSGINSLVNSSSPVTYEDKLSCLFLMKSSIEDVQMDYGSAICLHPGTGDYHDFFPESQGDKLLIEVQDAKQITHGQAVIPFSMIAENPVCSFLPNLRWQ*

Click here to download the sequence:
Link to NCBI Protein BLAST