Transcript Information: S_Transcript_226289.p1


Annotated TAIR IDAT5G48310.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19574961-19580362 | Reverse length=1156
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0335515893992
Replicate 21.4293169314669
Replicate 31.4092456143615
Condition 2: 8 Hour
Replicate 11.4523936926951
Replicate 21.0405510995222
Replicate 31.2747018501318
Condition 3: 24 Hour
Replicate 10.52616413723192
Replicate 21.2611921724379
Replicate 30.60750771407672


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_226289.p1 GENE.S_Transcript_226289~~S_Transcript_226289.p1 ORF type:complete len:1204 (+),score=242.26 S_Transcript_226289:130-3741(+)
ATGTTCACAGAAGGTTTGGATCAAAGCGCCATCAATTGGATCAAGCAGGGATCAGAAGTGGCAGTAGAACCAAGGTCCCCCTTGGCAGAAAATGTGGAGTTCGAAATGGGTCCCAAATCTCCGATTATTCCGAACACCAGCAATTACATGGCACCACACACATTGCCCCCACTCAAGTTCCCTTCTGGTTTGCTGAGTACACATAGTGTAGCTAGTCTTTGTCTGTCTAATTCTGATGAGCTTAGTGTTAGTAATTACAGTGATGAAGATGGTGATGAAAGTGTTGCTTCAGCACCTTATGATGATGATGATGATCTGGATGGTTGTTATTCTGAGAAACTCAACCATCATTTTTCGAGGTTTAATGATGTCGAGCATATGAGGAAGCTCAGTTGTCTTGCACACGGTAAAGAAAACGATGGTTTAAGAGCGGCCCCTAATATGGGAAGTAGACAAAATGCACCATTGATTAATAGAGGAATGTCGAAGATTAATCTTAAAGTTGAATTGTCAGAAACTGTCAGGAGATTCAGTGATATGGGGTATACTGAGCAGTTTATGACTCCAGATAGTTGCATTCGGCCTCCTGTTAGTTCACACCCGCTTAGCATGCAGGGAATACCCATTCGCCATAGCAAGTATTATGATGCCGCAGACCTGGGAACTCCCAGCGCTCCTCCTGTCAATCCTAGTGAGAAGGAGGGGCACGAGCCTGAAGATGAAGTGGAACAAGCAACTACTTTGAATGATATAATGGGTGTGCATTCAGGCAGCGGATTATACATGCCTAGAGTTGGCGATTATTGTACTGAGACTGAACATATTTTGTCCAAAGGAAAAGCAGAAAGTTGGATAAACAGTGAACTGAATGGGAGAGAAAATGATACCGGCACTGTAGTGGAAGAGGAAACACAACTACCTGACTGTACTGCGAACTCAGTGGACACTTTGCCTTGTTTTAGCATAAGTGGACAAAATGCCTGGCAAACTCTTGTAGCATATGATGCCTGTGTTAGGCTTTGCCTGCATGCATGGACGAAAGGCTGCCCAGATGCACCTGAGTTTCTACGTGATGGATGCGTTGTCCTCTGGACTGCTTTTGGGTTAAACAAGTTTTTGCTACATCCTCAAGGCAGTCAAGCAGTAAAATGTGGGGTTTCTAAGAGTGAAGAAAATACTTACTCTTCAAAATCAAAAAAAGTGGTTGGCAAGATCAGGGTTGAAGTGAAAAAGCTAAGAATCATTCCAAGAAGGAAACTCAAGAGCACATACTCCCAACGAGGTGCATTTTACATGCAAGCAGGGACAGAGTATGTTCGACAGGTTTCATCAATTGTGAAGAGTGGCATCAATTCATTGGTGAACTCATCATCGCCAGTGACATATGAAGACAAACTTTCATGCTTGTTCCTCATGAAGAGCTCCAAAGAGGATGCTCAAATGGATTATGGTTCTGCTGTATGCTTACATCCAGGAACTGGAGATTACCATGACTTCTTTCCCGAAAGTCAAGGGGATAAACTTCTGATAGAAGTTCAAGATGCAAAACAAATTACCCACGGTCAAGCTGTAATCCCATTTTCAATGATAGCTGAGAATACTAATGACAAAATTCGTTGGTGGCCAATCTACCATGACGAACACGAATGTGTCGGGAAGATCCAACTTGTCATAACAAGTTCGATCACAAATGAAGAGGATAATATAAAGAGTGGCTTGGTTGTGGAAACTGCTGCTTATGATTTATTGCTGGAAGCTGCCATGCGTGCACAACACTTCCATTCTCGAAATTTACATTTGCATGGGCCTTGGAAGTGGTTGCTTAGTGAATTTGCAGACTATTATGGAGTGTCTGATTCTTACACTAAGCTAAGGTATTTATCATATGTAATGAATGTGGCTACACCAACAAAAGATTGCTTGGAGCTCGTGCTGCATTTGCTTATGCCTGTTATGAAAGAGAGAAGTGAAAAAACATTGAATAGACAAGAGAAAAGTATTCTGTTGGAATGTGAAACACAAGTTGAGAGTCTCTTAGCAAATGTTTTTGAAAACTACAAATCATTGGATGAACTCTCTTCCATGGGATTGTCAGACTCCCTCACCCCGATACCAGAGACTGCTGCTCCAGCTTTGGCTCCTGCTGTGGAAGTCTTTTGCCTTCTTCATGATATTCTTACGCAAGATGCACAGACAATTTTGCGAAAGTATTTACAGAGAGCAGGTCAGAAGAGGTGTCGAAGGCATATGGTAGAGACTGATGAGCTTCTGTCGACAAACTCTGACAATGCACTGACAGACCCTGTATCCATCTCCACGGCATATTTGAAGATGAAGAACCTTTGCAGAAATATAAGCAGTGAAATCCTTGCAGACATCAAAGTCCACAATCAGCATTTACTTCCCAGTTCCATTGACCTGTCGAACCTTGCTGCCGCTGTTTATAGCACGGAATTGGCAAAGAGGCTCAAAGGGTTCCTGGCTGCTTGTCCTCCATCCAGTCCTTTGCCACATGTGAATGAACTTTTGGCAGCAACTTCTGATTTTGAGAGGGATCTTGAATCGTGGAATATCAGTCCCATTCAAGATGGTGTAGATTGCAAGGACTTGTTCCATCATTACATAATCGTATGGGTACAGGAGATGCAACTTGGATTGCTTGATCTCTGCAAGGCAGAAAAGGTGCCATGGTCTGGAATAATTACAAATCATTCAACATCACCCTTCGTAGAGAATATGTATTTGAAGATAAAGGATGCCCTCACTCAATATGACATGGTGATCAGCCGGTGGCCTCAATACACTTTGCCATTGGAAAACGCTACTGCTGATGTTGAGAGAGCAATCATAAAGGCACTGGAAAAGCAGTATAATGAGATCTTAGCTCCTTTGAAAGATAGCATCCCGAAGAAGCTTGGTATGCAGGTTCAGAAATTAGCTAGAAGGCAATCAACAACACTCTATGTTGTCCCTAATCAACTAGGTACCTTTCTGAACACAATCAAGAGGATTCTTGATGTTCTTCATTGTAGAGTTGAAGATATCCTGAAATCCTGGGCTTCATGTTTGCCTGTTATTGGGGAGAAAAAGTCATCCTTTGGGGAGCAGATGAATGGGATTACTGTGCTTCTGAGGACAAAGTACAAAAACTACATGCAAGCTACAGTGTCAAAGCTTTACAGCAATATGCAAGCTAGCCGAAGCACGCAACTGAAGAAAATCCTCGAGGAAACACAAGACTCGGATGGAGAGGCCGAGGTCCGCGAGAGAATGCAGATGCTGAGTTCTCAACTCATTGATTCCATATCGAACTTGCATGAGGTTTTTACGAATCAAATATTTATTGCACTGTGTTGTGGCTTTTGGGATAAAATGGGACAGAGTGTATTGAAGTTTTTGGAGGGAAGGAAAGAGAACCGGGTGTGGTACAAAGGATCATATTATGCTCTTGGGATCCTAGATGATACATTTGCTTCCCAGATGCAGCGTTTGCAAGGCAATTCCCTTAAGGAGAAAGATCTGGAGCCCCCGCGATCTGTGGTGGAGGCTCGCTCTATTCTTTGTAGAGATGCAACAAATGGAACAGATCAATCCACTTATTTCTATTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_226289.p1 GENE.S_Transcript_226289~~S_Transcript_226289.p1 ORF type:complete len:1204 (+),score=242.26 S_Transcript_226289:130-3741(+)
MFTEGLDQSAINWIKQGSEVAVEPRSPLAENVEFEMGPKSPIIPNTSNYMAPHTLPPLKFPSGLLSTHSVASLCLSNSDELSVSNYSDEDGDESVASAPYDDDDDLDGCYSEKLNHHFSRFNDVEHMRKLSCLAHGKENDGLRAAPNMGSRQNAPLINRGMSKINLKVELSETVRRFSDMGYTEQFMTPDSCIRPPVSSHPLSMQGIPIRHSKYYDAADLGTPSAPPVNPSEKEGHEPEDEVEQATTLNDIMGVHSGSGLYMPRVGDYCTETEHILSKGKAESWINSELNGRENDTGTVVEEETQLPDCTANSVDTLPCFSISGQNAWQTLVAYDACVRLCLHAWTKGCPDAPEFLRDGCVVLWTAFGLNKFLLHPQGSQAVKCGVSKSEENTYSSKSKKVVGKIRVEVKKLRIIPRRKLKSTYSQRGAFYMQAGTEYVRQVSSIVKSGINSLVNSSSPVTYEDKLSCLFLMKSSKEDAQMDYGSAVCLHPGTGDYHDFFPESQGDKLLIEVQDAKQITHGQAVIPFSMIAENTNDKIRWWPIYHDEHECVGKIQLVITSSITNEEDNIKSGLVVETAAYDLLLEAAMRAQHFHSRNLHLHGPWKWLLSEFADYYGVSDSYTKLRYLSYVMNVATPTKDCLELVLHLLMPVMKERSEKTLNRQEKSILLECETQVESLLANVFENYKSLDELSSMGLSDSLTPIPETAAPALAPAVEVFCLLHDILTQDAQTILRKYLQRAGQKRCRRHMVETDELLSTNSDNALTDPVSISTAYLKMKNLCRNISSEILADIKVHNQHLLPSSIDLSNLAAAVYSTELAKRLKGFLAACPPSSPLPHVNELLAATSDFERDLESWNISPIQDGVDCKDLFHHYIIVWVQEMQLGLLDLCKAEKVPWSGIITNHSTSPFVENMYLKIKDALTQYDMVISRWPQYTLPLENATADVERAIIKALEKQYNEILAPLKDSIPKKLGMQVQKLARRQSTTLYVVPNQLGTFLNTIKRILDVLHCRVEDILKSWASCLPVIGEKKSSFGEQMNGITVLLRTKYKNYMQATVSKLYSNMQASRSTQLKKILEETQDSDGEAEVRERMQMLSSQLIDSISNLHEVFTNQIFIALCCGFWDKMGQSVLKFLEGRKENRVWYKGSYYALGILDDTFASQMQRLQGNSLKEKDLEPPRSVVEARSILCRDATNGTDQSTYFYY*

Click here to download the sequence:
Link to NCBI Protein BLAST