Transcript Information: S_Transcript_22635.p1


Annotated TAIR IDAT5G04040.1
Annotated Gene NamePatatin-like phospholipase family protein
Annotated Gene Symbol(s)SDP1
Annotation TypeOrtholog
Chromosome Positionchr5:1090346-1093003 | Forward length=825
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.358437628714
Replicate 219.588458018354
Replicate 320.704987589182
Condition 2: 8 Hour
Replicate 136.148529614673
Replicate 235.988359318813
Replicate 335.684123385442
Condition 3: 24 Hour
Replicate 120.160581726132
Replicate 216.203566220473
Replicate 317.796863108283


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22635.p1 GENE.S_Transcript_22635~~S_Transcript_22635.p1 ORF type:complete len:856 (+),score=191.69,DUF3336|PF11815.4|2.8e-27,Patatin|PF01734.18|7.3e+02,Patatin|PF01734.18|1.3e-15 S_Transcript_22635:918-3485(+)
ATGGATATAAGTAATGAAGCAACAGTTGATTCATTCTCAATTGGACCAACATCCATTGTTGGTAGAACAATTGCCTTTAGGATACTATTTTGCAAGTCTATGACACATTTTAGACATCAATTGGCAATTGTATTGGTGAAGTCAATTAGAGGGTTTACAGATTATGTAGCCCCTGTGTTTTCATGGTTTCATCCTCGAAACCCTCAGGGGATATTGGCAATGGTAACCATTATAGCTTTCGTGTTGAAACGATACACAAATTTCAAAATGAGGGCTGAGATGGCTTATAGGAGGAAATTTTGGCGAAATATGATGAGGTCTGCCTTGACTTATGAGGAATGGGCTCATGCTGCTAAGATGTTGGAAAAGGAAAGTCCGAAAATGAATGAAGGCGAGTTTTATGATGAGGAGTTTATGAGGAATAAGCTCCAAGAGTTGAGGCATCGTCGCCAAGAAGGATCATTGAGAGACATTATATTTTGTATGAGAGCGGATCTTATTAGAAATCTTGGGAATATGTGTAATCCTGAGCTTCATAAGGGGAGGCTTCAAGTGCCTAAACTCATAAAAGAGTACATCGATGAAGTCACCACTCAGTTGAGGATGGTTTGTGATTCGGATTCCGAAGAGCTCTTGTTGGAAGAGAAGCTTGCTTTTATGCATGAGACGAGACATGCTTTCGGGAGGACGGCTTTGCTTTTGAGTGGTGGTGCTTCTCTTGGATCGTTCCATGTTGGTGTTGTTAAAACATTGGTAGATCATAAACTTTTGCCTAGGATCATTGCTGGTTCTAGTGTAGGATCGATTATGTGTGCTGTCGTTGCTACTAGGTCTTGGCCTGAGCTTCAGAGTTTCTTTGAGGATTCCTGGCATTCTCTGAAGTTTTTTGACCAGATTGGTGGGATTTTTACAGTTGTTAAGAGGGTCATGACATTTGGTGCTGTTCATGAGATTAGGCAGCTGCAAATGATGTTGAGGAATCTCACAAGCAATCTGACTTTCCAGGAGGCTTATGACATGACTGGCAGAATTCTTGGTATAACAGTCTGCTCTCCTAGGAAACACGAGCCTCCTCGCTGCCTTAACTACTTGACTTCCCCCCACGTTGTTATATGGAGTGCAGTGACAGCTTCTTGTGCCTTTCCTGGCCTTTTTGAGGCTCAGGAGCTCATGGCTAAAGATAGAACTGGTGAACTTGTACCTTACCATCCACCTTTTCATCTTGGTCCTGAGGAAGGTGTGACCCCATCACGTCGGTGGAGAGATGGTAGCTTGGAGAGTGATTTGCCAATGATGCAGTTAAAGGAGCTTTTCAATGTCAATCATTTCATTGTAAGTCAGGCAAACCCTCATATCTCACCTTTATTGAGGCTGAAGGACTTTGTCAGAGCATATGGAGGCAACTTTGCAGCTAAGCTTGCTCAATTGGCTGAGATGGAGGTGAAACACAGGTGTAACCAGATACTGGAACTGGGTTTTCCATTGGGTGGAGTTGCCAAATTGTTTGCTCAGGCATGGGAGGGTGATGTCACAGTAGTGATGCCCGCTACACTTGCTCAGTACTCAAAAATTATTCAGAACCCATCTTATGGCGAGCTCCAAAAGGCCGCAAACCAAGGTAGAAGGTGCACCTGGGAAAAGCTTTCTGCTATAAAAGCCAACTGTGGCATTGAGCTCGCATTGGACGAGTGTGTTGCAATTCTCAACCACATGCGTAGATTGAAGCGGAGTGCTCAGAGAGCTGCTGCAGCTGCAGCTGCTTCTCAAAATCAGACGCAGACCCTATCTAGCACAGTACGATTTAACGCTTCACGAAGGATTCCATCATGGAACTGCATTGCCCGAGAAAACTCCACTGGATCTCTTGATGATGAAATGCTTGCTGATGTGGCTTCCTTTCAGCAAGTTACTAGCCCAGTTGGTGCATCCTCGAGCCGACATCACCAGACTGGACGGAACATGTTTGACGGCAGTGATAGTGAATCCGAGGGTTTTGATTTGAACACGTGGACAAGAACTGGTGGACCCCTGATGAGGACTACGTCTGCAAACAAGTTTGTTGATTTTGTTCAGAGTTTAGAGATGGATGTTGAAACCAAGCAAAATTTGACAGGTCACCTGAACTCTGTTGTGATGCAAACAGTGGCCAGGGACTCGAGGGTGCCAACACCTGACCGATGCTCGGAGAACGCTGAATTTGATCAGAGGGATTCTGGTAGCCGAGGGAGTATGAGCAATGCTAGCATTAGGGTTACTGAAGGTGACCTTTTGCAGCCGGAGAGAATACACAATGGGATGGTGTTGAACGTTGTCAAGAAGGAAGACCTCACAGCTTCAGCTCGAAGTAATGATTCAGAGAGCTTCAACAGCATTCCAAGCTCAGAGGCTGAGTGTGTGCAACTTGAATGCCCAGAACAGGAGACTGATATCAGCTCATCATCAGAACACAGCGATGAGGATGAAAAGAACCGCCTCAACGAAGTTCATTCTCATTCTAAACCAGTTGACCATCCCGACATGGAAAACAGAAATGGTCCCTCCACTTCAGATGCTGTTTCTGATACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22635.p1 GENE.S_Transcript_22635~~S_Transcript_22635.p1 ORF type:complete len:856 (+),score=191.69,DUF3336|PF11815.4|2.8e-27,Patatin|PF01734.18|7.3e+02,Patatin|PF01734.18|1.3e-15 S_Transcript_22635:918-3485(+)
MDISNEATVDSFSIGPTSIVGRTIAFRILFCKSMTHFRHQLAIVLVKSIRGFTDYVAPVFSWFHPRNPQGILAMVTIIAFVLKRYTNFKMRAEMAYRRKFWRNMMRSALTYEEWAHAAKMLEKESPKMNEGEFYDEEFMRNKLQELRHRRQEGSLRDIIFCMRADLIRNLGNMCNPELHKGRLQVPKLIKEYIDEVTTQLRMVCDSDSEELLLEEKLAFMHETRHAFGRTALLLSGGASLGSFHVGVVKTLVDHKLLPRIIAGSSVGSIMCAVVATRSWPELQSFFEDSWHSLKFFDQIGGIFTVVKRVMTFGAVHEIRQLQMMLRNLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRTGELVPYHPPFHLGPEEGVTPSRRWRDGSLESDLPMMQLKELFNVNHFIVSQANPHISPLLRLKDFVRAYGGNFAAKLAQLAEMEVKHRCNQILELGFPLGGVAKLFAQAWEGDVTVVMPATLAQYSKIIQNPSYGELQKAANQGRRCTWEKLSAIKANCGIELALDECVAILNHMRRLKRSAQRAAAAAAASQNQTQTLSSTVRFNASRRIPSWNCIARENSTGSLDDEMLADVASFQQVTSPVGASSSRHHQTGRNMFDGSDSESEGFDLNTWTRTGGPLMRTTSANKFVDFVQSLEMDVETKQNLTGHLNSVVMQTVARDSRVPTPDRCSENAEFDQRDSGSRGSMSNASIRVTEGDLLQPERIHNGMVLNVVKKEDLTASARSNDSESFNSIPSSEAECVQLECPEQETDISSSSEHSDEDEKNRLNEVHSHSKPVDHPDMENRNGPSTSDAVSDT*

Click here to download the sequence:
Link to NCBI Protein BLAST