Transcript Information: S_Transcript_226385.p1


Annotated TAIR IDAT5G08310.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2672756-2675254 | Reverse length=832
E-Value5.1E-255
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86848955079843
Replicate 20.38571310415236
Replicate 30.42990060800934
Condition 2: 8 Hour
Replicate 11.2924478980081
Replicate 21.4340928615209
Replicate 31.5403060040896
Condition 3: 24 Hour
Replicate 10.40736379469639
Replicate 20.52829397613863
Replicate 30.52913379870873


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_226385.p1 GENE.S_Transcript_226385~~S_Transcript_226385.p1 ORF type:complete len:858 (+),score=165.02,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|0.0091,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|0.037,PPR_2|PF13041.2|5.5e-06,PPR_2|PF13041.2|2.9e-08,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|2.7e+03,PPR_2|PF13041.2|0.00056,PPR_2|PF13041.2|6.5e-11,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|5.2e-05,PPR_2|PF13041.2|3.6e-16,PPR_2|PF13041.2|6.5e-18,PPR_2|PF13041.2|1.3e-12,PPR_2|PF13041.2|1.5e-07,PPR_1|PF12854.3|9e+02,PPR_1|PF12854.3|43,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|0.072,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|4.3e-05,PPR_1|PF12854.3|4.1e+03,PPR_1|PF12854.3|3.3e-06,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|1.7e-05,PPR_1|PF12854.3|11,PPR_1|PF12854.3|0.3,PPR_1|PF12854.3|9.6e-11,PPR_1|PF12854.3|6.9e-12,PPR_1|PF12854.3|9e-13,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|1.9e+03,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|5.4,PPR|PF01535.16|15,PPR|PF01535.16|0.00033,PPR|PF01535.16|0.013,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.00053,PPR|PF01535.16|2.3e+02,PPR|PF01535.16|0.0044,PPR|PF01535.16|7e-06,PPR|PF01535.16|0.0051,PPR|PF01535.16|0.0085,PPR|PF01535.16|0.031,PPR|PF01535.16|0.00032,PPR|PF01535.16|7.3e-07,PPR|PF01535.16|3.8e-07,PPR|PF01535.16|0.00013,PPR|PF01535.16|88,PPR_3|PF13812.2|8e+03,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|0.062,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|5.3,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|0.6,PPR_3|PF13812.2|4.1e-06,PPR_3|PF13812.2|0.00066,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|3.8e-06,PPR_3|PF13812.2|0.00062,PPR_3|PF13812.2|0.0045,PPR_3|PF13812.2|3.6e+02,MRP-S27|PF10037.5|1.5e+02,MRP-S27|PF10037.5|0.35,MRP-S27|PF10037.5|1.1e+03,MRP-S27|PF10037.5|4.5,MRP-S27|PF10037.5|80,MRP-S27|PF10037.5|11,MRP-S27|PF10037.5|0.0097,TPR_14|PF13428.2|4.2e+02,TPR_14|PF13428.2|5.1e+02,TPR_14|PF13428.2|2.9e+02,TPR_14|PF13428.2|8.6e+02,TPR_14|PF13428.2|1.5e+02,TPR_14|PF13428.2|6.8e+03,TPR_14|PF13428.2|57,TPR_14|PF13428.2|1.8e+03,TPR_14|PF13428.2|4.1e+03,TPR_19|PF14559.2|1.3e+03,TPR_19|PF14559.2|3.9e+02,TPR_19|PF14559.2|1.1e+04,TPR_19|PF14559.2|2.1,TPR_19|PF14559.2|9.9e+02,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|5.6e+02,TPR_19|PF14559.2|2.4e+02,TPR_16|PF13432.2|14,TPR_16|PF13432.2|4.9e+03,TPR_16|PF13432.2|0.97,TPR_16|PF13432.2|1.6e+04,TPR_16|PF13432.2|6e+02,TPR_16|PF13432.2|4.9e+03 S_Transcript_226385:133-2706(+)
ATGCGAGGACACCCATTTATGGCTACATTAAGAGCACTCTCCAACAACTGGCTTCTCCGAAAATCACTTGAAAAATCCATGTATGTTCATCCTTCATTTCAACTCCTTTTCTATTTCTCTGTTTCCCATTGTATAAAGATTCCACCTTTTCGTAAATTTAGCCGATTAATTGGGTCCAATGCCCACAAAAGCACTGATCTTTCTCCTGATAATGAAAGGGTTGTTGATGGGTTGATTTTCATCTTCACCCAAAAACACTCGGACACCAAAAACCAAGAACTGAGTCAACTCGGTTCAAAACTCACCCCTGAAATCGTTGAACCTGTGTTAAAAAGCCTCAGGAGTTGGAAAATTGCTTACAGGTTCTTCATTTGGGCCAAAACCCAAATGGGGTTTTCCCACAGTTGCTATACTTATAATGCTATGGCTTCTATCCTATCAGGTGTTCGACAAAATGCCCCACTGAAAGCTCTTGTTTTAGATGTTGTGAATTCTCGTTGTTCTATGACTCCTGGTGCTTTGGGCTTTCTTATTAGGTGTTTGGGAAGTGTGGGGTTGGTGCAAGAAGCTAATGTGCTGTTTGATCAAGTTAGGCTGTTGGGTCTCTGTGTTCCCAACAATTATAGTTATAATTGTTTGTTAGAGACCATTGCTAAATCGAGCTCTGTTGATCTAGCTGAGATGAGATTGAATGAGATGCTTAGTTTTGGGTGGGAGGTTGATAGGTACACTTTGACCCCACTTCTGCAGGTTTACTGCAATGCAGGCAGCTTTGAGAAGGCATTGGGTGTTTTTGATCAAATGTTCGAAATGGGGTGGGTTGATGGACATGTTTTGTCGATCTTAGTTCTTTCTTTTAGCAAGCGGGGAGAAGTGGATAAGGCTTTTGAGTTGATTGAGAGGATGGAAGGTTTTAATGTGAGATTGAATGAGAAGACATTTTATGTACTAATAAATGGGTTTGTTGCTAGTTCTAGGGTGGATAAGGCCCTTCAACTCTTTGAAAAAATGAGTAGATTAGGGTTCTCTGCTGATGTTGCTATCTATGACGTGCTAATTGGAGGGCTGTGCAAAGTTAAGGATCTCGAGAGAGCATTGTGTTTGTACTCGGAAATGAGAAACCGTGAGATATCTCCTGATGTTAGAATACTGACAAAGCTTATATCATCTGTTAGTGATGAAGAGGTAATTGCAAAGTTGCTTGAGGAAAATGCAGAGGGTGTTGATGATAAATCACTGAAATTGCTTTGCGATTCTGCTTTGACTGCTTTCATCAGCAGTGGTTTAACTGATAGAGCTTATAACCTGGTGAAAAAATTGATGGAAGATGAAATTCAGTATCAGAACAGGATAGCGGAAATTTTCAAGTCTGAAGGCACAGTTTGTCTAGATTCTACTTCTTTCAATATCATTAATGATGCTTTATGTCATGATGGTAGATTGGATGAAGCACTGCAACTGTTCAGAGTCATGGATAAAATCAGGTGTCAGAAGGATGTATTACTTTACAACAATTTGATTGATGCTTTGAGCCGTGCTGGCAGAGTAGCTGACAGTCTTGATCTTTTAAAGGAGATGAAGCAGTCAGGAAGTCAGCCGACTCACTATACATACAACTGCATATATAGGTATTTTTGTAGACAAGGAGATGTCACAGAAGCTATGAGCATAGTGAAAGAGATGCATCGTTACCATCATGAACCATGGATAAAGAATTCTACCACCCTTATTCAACAGCTTTGTAAACATGGGAGAGCAGTGGAAGTTTCTAATTATCTTTCTGAAATGCTTAAAGAAGGTCTTTTTCTTCATCTAGTTCCGTACTCTGCAGCTATTGATGGGCTTTTTAAACTTCAAGAAGTGGATCGCGCTTTAGAGTTGTTCAATGATATATGTTCCCGTGGTTACAGACCTGATGTTGTTGCTTGTAACATTTTAATCAATGGGCTCTGTAGAGCTACAAGAATGTCAGAAGCTCAGGAGGTACTGAATGCTATGCTGGCTGGAGGGCTTGTGCCTTCAACCATAACCTATAACTCTCTTATTGATGGATGGTGCAAGGGCGGTGATGTTGATCAAGCTCTGGTTGTCTTCTCTATGATGTCTAGGGACAATATGAAGCCTAATGTCATTACTTATACAATATTAGTAGATGGGCTATGCAATGCTGGTCGGCCTGATGATGCTGTTATGCTTTGGAATGAAATGGAGGGAAAAGCTTGTTCACCCAACAGAATTGCTTTCATGGCTTTAATCACTGGTCTCTGTAAGAATGATAGGCCAGATATGGCACTACTATATCTCCGTGAAATGGAGAAAAAGGAACTTAGAGCTGACAGTTATGTTTATGTAGCTCTGTTGGATTCTTTTATGTTGAACAACAATCCTGTATCGGCTTTAGTTATATTGAAAGAGATAGCTCACCAGGAAATGTTTCCAGACCCTTTAGATAAAAATCATGCACTTGTAAAAGATGCAATAGCCAAACTATCAGATGATCCCCTCACTTCTTCCAATGTCAATACTCTTCTTGCAGGAGGAGTCATACCTAGTGGGTTTTGGTGTCAAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_226385.p1 GENE.S_Transcript_226385~~S_Transcript_226385.p1 ORF type:complete len:858 (+),score=165.02,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|0.0091,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|0.037,PPR_2|PF13041.2|5.5e-06,PPR_2|PF13041.2|2.9e-08,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|2.7e+03,PPR_2|PF13041.2|0.00056,PPR_2|PF13041.2|6.5e-11,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|5.2e-05,PPR_2|PF13041.2|3.6e-16,PPR_2|PF13041.2|6.5e-18,PPR_2|PF13041.2|1.3e-12,PPR_2|PF13041.2|1.5e-07,PPR_1|PF12854.3|9e+02,PPR_1|PF12854.3|43,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|0.072,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|4.3e-05,PPR_1|PF12854.3|4.1e+03,PPR_1|PF12854.3|3.3e-06,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|1.7e-05,PPR_1|PF12854.3|11,PPR_1|PF12854.3|0.3,PPR_1|PF12854.3|9.6e-11,PPR_1|PF12854.3|6.9e-12,PPR_1|PF12854.3|9e-13,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|1.9e+03,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|5.4,PPR|PF01535.16|15,PPR|PF01535.16|0.00033,PPR|PF01535.16|0.013,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.00053,PPR|PF01535.16|2.3e+02,PPR|PF01535.16|0.0044,PPR|PF01535.16|7e-06,PPR|PF01535.16|0.0051,PPR|PF01535.16|0.0085,PPR|PF01535.16|0.031,PPR|PF01535.16|0.00032,PPR|PF01535.16|7.3e-07,PPR|PF01535.16|3.8e-07,PPR|PF01535.16|0.00013,PPR|PF01535.16|88,PPR_3|PF13812.2|8e+03,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|0.062,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|5.3,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|0.6,PPR_3|PF13812.2|4.1e-06,PPR_3|PF13812.2|0.00066,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|3.8e-06,PPR_3|PF13812.2|0.00062,PPR_3|PF13812.2|0.0045,PPR_3|PF13812.2|3.6e+02,MRP-S27|PF10037.5|1.5e+02,MRP-S27|PF10037.5|0.35,MRP-S27|PF10037.5|1.1e+03,MRP-S27|PF10037.5|4.5,MRP-S27|PF10037.5|80,MRP-S27|PF10037.5|11,MRP-S27|PF10037.5|0.0097,TPR_14|PF13428.2|4.2e+02,TPR_14|PF13428.2|5.1e+02,TPR_14|PF13428.2|2.9e+02,TPR_14|PF13428.2|8.6e+02,TPR_14|PF13428.2|1.5e+02,TPR_14|PF13428.2|6.8e+03,TPR_14|PF13428.2|57,TPR_14|PF13428.2|1.8e+03,TPR_14|PF13428.2|4.1e+03,TPR_19|PF14559.2|1.3e+03,TPR_19|PF14559.2|3.9e+02,TPR_19|PF14559.2|1.1e+04,TPR_19|PF14559.2|2.1,TPR_19|PF14559.2|9.9e+02,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|5.6e+02,TPR_19|PF14559.2|2.4e+02,TPR_16|PF13432.2|14,TPR_16|PF13432.2|4.9e+03,TPR_16|PF13432.2|0.97,TPR_16|PF13432.2|1.6e+04,TPR_16|PF13432.2|6e+02,TPR_16|PF13432.2|4.9e+03 S_Transcript_226385:133-2706(+)
MRGHPFMATLRALSNNWLLRKSLEKSMYVHPSFQLLFYFSVSHCIKIPPFRKFSRLIGSNAHKSTDLSPDNERVVDGLIFIFTQKHSDTKNQELSQLGSKLTPEIVEPVLKSLRSWKIAYRFFIWAKTQMGFSHSCYTYNAMASILSGVRQNAPLKALVLDVVNSRCSMTPGALGFLIRCLGSVGLVQEANVLFDQVRLLGLCVPNNYSYNCLLETIAKSSSVDLAEMRLNEMLSFGWEVDRYTLTPLLQVYCNAGSFEKALGVFDQMFEMGWVDGHVLSILVLSFSKRGEVDKAFELIERMEGFNVRLNEKTFYVLINGFVASSRVDKALQLFEKMSRLGFSADVAIYDVLIGGLCKVKDLERALCLYSEMRNREISPDVRILTKLISSVSDEEVIAKLLEENAEGVDDKSLKLLCDSALTAFISSGLTDRAYNLVKKLMEDEIQYQNRIAEIFKSEGTVCLDSTSFNIINDALCHDGRLDEALQLFRVMDKIRCQKDVLLYNNLIDALSRAGRVADSLDLLKEMKQSGSQPTHYTYNCIYRYFCRQGDVTEAMSIVKEMHRYHHEPWIKNSTTLIQQLCKHGRAVEVSNYLSEMLKEGLFLHLVPYSAAIDGLFKLQEVDRALELFNDICSRGYRPDVVACNILINGLCRATRMSEAQEVLNAMLAGGLVPSTITYNSLIDGWCKGGDVDQALVVFSMMSRDNMKPNVITYTILVDGLCNAGRPDDAVMLWNEMEGKACSPNRIAFMALITGLCKNDRPDMALLYLREMEKKELRADSYVYVALLDSFMLNNNPVSALVILKEIAHQEMFPDPLDKNHALVKDAIAKLSDDPLTSSNVNTLLAGGVIPSGFWCQE*

Click here to download the sequence:
Link to NCBI Protein BLAST