Transcript Information: S_Transcript_226402.p1


Annotated TAIR IDAT2G22070.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9383602-9385962 | Forward length=786
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30511721161353
Replicate 20.28105464404477
Replicate 30.16445751921682
Condition 2: 8 Hour
Replicate 10.7063186601853
Replicate 21.196965150151
Replicate 30.73315654182738
Condition 3: 24 Hour
Replicate 10.25045089352274
Replicate 20.2309687803959
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_226402.p1 GENE.S_Transcript_226402~~S_Transcript_226402.p1 ORF type:complete len:785 (+),score=129.97,PPR|PF01535.16|0.00053,PPR|PF01535.16|0.0089,PPR|PF01535.16|4e-05,PPR|PF01535.16|0.00031,PPR|PF01535.16|0.016,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|5.1,PPR|PF01535.16|0.0017,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|0.82,PPR|PF01535.16|1.5e-07,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|0.028,PPR|PF01535.16|7.7e+03,PPR|PF01535.16|0.073,PPR_2|PF13041.2|0.0095,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|0.00047,PPR_2|PF13041.2|8.9e-06,PPR_2|PF13041.2|21,PPR_2|PF13041.2|3.9e-05,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|5.4e-09,PPR_2|PF13041.2|19,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|2.5e+03,PPR_1|PF12854.3|0.041,PPR_1|PF12854.3|0.0022,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|6.6,PPR_1|PF12854.3|9.9e+02,PPR_1|PF12854.3|0.0046,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|4.3e+03,PPR_1|PF12854.3|32,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.0031,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|0.0062,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|21,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|3.2,DYW_deaminase|PF14432.2|1.1e+04,DYW_deaminase|PF14432.2|7e-37,TPR_14|PF13428.2|8.6e+02,TPR_14|PF13428.2|3.8e+02,TPR_14|PF13428.2|4.4e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|8,TPR_14|PF13428.2|52,TPR_14|PF13428.2|4.6e+03,TPR_14|PF13428.2|9.7e+02,TPR_14|PF13428.2|1.6e+03,TPR_14|PF13428.2|1.5e+04 S_Transcript_226402:161-2515(+)
ATGAGCTCATACCCTCATTCCTTTTCCTCTACCAGTGATCACTATGCCTCTCTGCTTCAAGCTACCCTCAAAACCAAATCCCTTTTTGCCGGAAAATCAGTCCATTCTCAAATCATCAAACAAGGCCTTGTCACCAGTGTATATCTTTTGAATAATCTCCTCAATTTGTACGTCAAATGTGGGTTAATCTCCGATGCCCACCAACTGTTTGATGAAATGCCAGTGAAAAATACCTTTTCCTGGAACAGCATTGTCTCAGGGTATGCTAAGGACGGATCTTTGGGTGTTGCTCATCGTGTTTTCGAGCAAATTCCTGAACCAGATTCTGTTTCTTGGACTGCAATGATTGTGGGTTATAACCAGATGGGTTACTTTGGAAATGCAGTCAAGATGTTTCTGGATATGATTTCGAGTGGTGTTGCACCGACCCAGTTCACAGTTACTAATATTCTTGCATCCTGTGCTTACACGAAAGCGATCAGTGTTGGAAAGAAGGTTCACTCGTTTGTTGTTAAGCATGGACTTGGTAGTTATGTCGCGGTTGGGAATTCACTTCTTAACATGTACGCAAAGACCGGTGATCTTGAGAGGGCGAGGATTGTTTTTAATAGGATGAGGGTGAGAAATGTTGCGAGCTGGAATACTATGATTTTCTTGCATATGCACTCTGGTCGTGTTGATCTTGCTCATGCTCAGTTTGAGCAAATGGCTGAACGTGACATTGTGTCTTGGAATTCTATGGTTACAGGGTACAATCAACATGGGTTTGATATCAAGGCTCTTGAAATATTCTCAAGAATGGTCAAGGATTCTTCTCTGCGTCCTGATAAGTTTACGTTGGCTAGTGCTTTATCAGCTTGTGCAAATCTTGAGAACTTGAGAGCTGGGAAACAAATCCACACTTATATGATAAGGACCAAGTTTTATATGTATGGGGCTGTTGAGAATGCTTTGATCTCAATGTACTCTAAGTGTGGAGGTGTAAAAAGTGCTCAAAAGATTATTGAGAACAATGGGGTTTCCAATCTCAATGTGATAGCATTTACAGCATTAATTGATGGGTATGTGAAGATTGGAGATATTAATCCTGCCAGAAAGCTATTTGACTCATTAAAAGATCGAGATGTAATTGTTTGGACGGCAATGATCGTAGGTTATGAGCAGAATGGCATGTATGACGATACAGTGAGGTTATTCAGATTAATGCTTAAGGAAGGACCAAGGCCAAATCATTACACTCTAGCTGCAATGTTAAGTGTTTGTTCGAGCTTGGCTAATCTGGAGCATGGGAGACAAATCCATGGAGTTGCCATAAGGTCAGGAGAAGCATTGTCAGTTTCTGTATGCAATGCATTAATCACGATGTATGCCAAGTCTGGAAGCATAAATAACGCTAGGCTTGTTTTTAAGCTTGTCGACTGGTACAGTGATACTGTTACTTGGACTTCCATAATCATAGCTTTAGCTCAACATGGCCTAGGAGAAGAAGCGGTTGAAATGTTTGAGAAAATGCTGATGTTAGGTATAAAGCCGGACCATATAACTTATCTTGGTGTGCTTATTGCATGCACACATATTGGATTGGTAGAAAAAGGAAAAACTTACTACAACATAATGCAAAATGTGCACAAAATTGAACCAACTCATAGCCACTATGCTTGCATGATTGACCTTCTTGGACGTGCTGGTTTACTACAAGAAGCACAAGATTTTATAGAGCAAATGCCTGTTGAACCTGACAATATTGCTTGGGGTTCATTTTTAGCATCTTGTACAGTTCATAAAAATCCAGATTTGGCGAAATTTGCAGCAGAGAGATTGCTTCTTATCGATCCAGAGAATAGTGGAGCCTTCTCAGCCCTTGCCAATGTTAATGCGGCATGTGGAAAATGGTCAGAGGCTGCCAAAGTCAGAAAGTCGATGAAAGAAAAAGGAGTCAAGAAAGACCAAGGACTTAGTTGGCTTCAGCTCAGGAATGAAGTTCATGTCTTTGGCGTTGATGATGCTCTTCACCCTCAACGAGAAGCAATCTATGCATTGATGGCAAAAATCTGGGAGGACATCAAGAAGATGGGCTTCATTCCAGATACTGGTTCAGTGCTGCATGACCTTGATGAAGAATTAAAGGAACAAATTTTGAAGCATCATAGTGAGAAGCTTGCTATAGCATTTGGTTTACTGAATACCCCTGATAATACTACGTTAAGAATAAAGAAAAACTTGCGTGTCTGCAATGACTGTCATTCCGCTATCAAATTCATTTCAAAGCTAGTGGGCAGAGAAATTATACTCAGGGATGCTACACGCTTCCACCATTTCAAAGGCGGTGTTTGTTCTTGTAGGGATTTTTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_226402.p1 GENE.S_Transcript_226402~~S_Transcript_226402.p1 ORF type:complete len:785 (+),score=129.97,PPR|PF01535.16|0.00053,PPR|PF01535.16|0.0089,PPR|PF01535.16|4e-05,PPR|PF01535.16|0.00031,PPR|PF01535.16|0.016,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|5.1,PPR|PF01535.16|0.0017,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|0.82,PPR|PF01535.16|1.5e-07,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|0.028,PPR|PF01535.16|7.7e+03,PPR|PF01535.16|0.073,PPR_2|PF13041.2|0.0095,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|0.00047,PPR_2|PF13041.2|8.9e-06,PPR_2|PF13041.2|21,PPR_2|PF13041.2|3.9e-05,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|5.4e-09,PPR_2|PF13041.2|19,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|2.5e+03,PPR_1|PF12854.3|0.041,PPR_1|PF12854.3|0.0022,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|6.6,PPR_1|PF12854.3|9.9e+02,PPR_1|PF12854.3|0.0046,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|4.3e+03,PPR_1|PF12854.3|32,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.0031,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|0.0062,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|21,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|3.2,DYW_deaminase|PF14432.2|1.1e+04,DYW_deaminase|PF14432.2|7e-37,TPR_14|PF13428.2|8.6e+02,TPR_14|PF13428.2|3.8e+02,TPR_14|PF13428.2|4.4e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|8,TPR_14|PF13428.2|52,TPR_14|PF13428.2|4.6e+03,TPR_14|PF13428.2|9.7e+02,TPR_14|PF13428.2|1.6e+03,TPR_14|PF13428.2|1.5e+04 S_Transcript_226402:161-2515(+)
MSSYPHSFSSTSDHYASLLQATLKTKSLFAGKSVHSQIIKQGLVTSVYLLNNLLNLYVKCGLISDAHQLFDEMPVKNTFSWNSIVSGYAKDGSLGVAHRVFEQIPEPDSVSWTAMIVGYNQMGYFGNAVKMFLDMISSGVAPTQFTVTNILASCAYTKAISVGKKVHSFVVKHGLGSYVAVGNSLLNMYAKTGDLERARIVFNRMRVRNVASWNTMIFLHMHSGRVDLAHAQFEQMAERDIVSWNSMVTGYNQHGFDIKALEIFSRMVKDSSLRPDKFTLASALSACANLENLRAGKQIHTYMIRTKFYMYGAVENALISMYSKCGGVKSAQKIIENNGVSNLNVIAFTALIDGYVKIGDINPARKLFDSLKDRDVIVWTAMIVGYEQNGMYDDTVRLFRLMLKEGPRPNHYTLAAMLSVCSSLANLEHGRQIHGVAIRSGEALSVSVCNALITMYAKSGSINNARLVFKLVDWYSDTVTWTSIIIALAQHGLGEEAVEMFEKMLMLGIKPDHITYLGVLIACTHIGLVEKGKTYYNIMQNVHKIEPTHSHYACMIDLLGRAGLLQEAQDFIEQMPVEPDNIAWGSFLASCTVHKNPDLAKFAAERLLLIDPENSGAFSALANVNAACGKWSEAAKVRKSMKEKGVKKDQGLSWLQLRNEVHVFGVDDALHPQREAIYALMAKIWEDIKKMGFIPDTGSVLHDLDEELKEQILKHHSEKLAIAFGLLNTPDNTTLRIKKNLRVCNDCHSAIKFISKLVGREIILRDATRFHHFKGGVCSCRDFW*

Click here to download the sequence:
Link to NCBI Protein BLAST