Transcript Information: S_Transcript_22739.p1


Annotated TAIR IDAT2G06000.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:2328000-2329610 | Reverse length=536
E-Value1.9E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2715746199276
Replicate 24.0161579099968
Replicate 34.4471845875349
Condition 2: 8 Hour
Replicate 15.2431219692242
Replicate 24.9715219199393
Replicate 35.8454806670871
Condition 3: 24 Hour
Replicate 14.4929192994839
Replicate 24.5006150648066
Replicate 35.1875126790664


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22739.p1 GENE.S_Transcript_22739~~S_Transcript_22739.p1 ORF type:complete len:423 (+),score=57.82,PPR_2|PF13041.2|4.1,PPR_2|PF13041.2|5.4e-18,PPR_2|PF13041.2|7.7e-09,PPR_2|PF13041.2|6.1e-18,PPR_2|PF13041.2|2.8e-12,PPR_2|PF13041.2|5.4e-18,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|3.2e-13,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|31,PPR_1|PF12854.3|12,PPR_1|PF12854.3|3e-11,PPR_1|PF12854.3|6.7e-12,PPR_1|PF12854.3|2.6e-12,PPR_1|PF12854.3|1e-05,PPR_1|PF12854.3|1.1e-10,PPR_1|PF12854.3|4.2e-09,PPR_1|PF12854.3|3.8e-07,PPR_1|PF12854.3|1.3e-08,PPR_1|PF12854.3|1.4,PPR|PF01535.16|57,PPR|PF01535.16|3.2e-07,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|2.1e-10,PPR|PF01535.16|7e-05,PPR|PF01535.16|3.5e-08,PPR|PF01535.16|0.00017,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|0.28,PPR_3|PF13812.2|8.5e+02,PPR_3|PF13812.2|0.00066,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|9e-08,PPR_3|PF13812.2|7.6,PPR_3|PF13812.2|0.0089,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|38,PPR_3|PF13812.2|81,MRP-S27|PF10037.5|1.3e-09,MRP-S27|PF10037.5|2.8,MRP-S27|PF10037.5|0.17,MRP-S27|PF10037.5|14 S_Transcript_22739:359-1627(+)
ATGTCTTTTTGGTCAACATCATTTATGGGACGTCTTTCTTGCCGGCGTTTTTTCTCCACTTTTCGGGCCGTTTCGTGCAACATAGCTCGTACTGGTAGTAAGTCAGACATACCCATGAATGTGATGGGAAAGAATAGTTCAAGTATTGTTGTTGTTGTAAATAATAATAAGTTTTTGAATACCCTTATCAAGCGAAATAGATTAGATGAGGCTGTTACTTTCTTTAATGAGAAAATGGTATCAAACAATTGCATAGATACTTGTTCTTTCAATATCTTGATTAGAGGGTTATGTAAGGCTGGCCAGGTTAATGAGGCTTTTCGGTTTTTCGAGAGTATGACTAATCATTATGGTTTGTTTCCTGATGTTGTTACCTACAATACCTTGATTAATGGGTTGTGTAGGGTTCATGAGGTTAGTAAAGCTTGTGAGTTGCTTATGGAGGTTCGATCGAGGGATGATGTTTCGGCTAATGTTGTGACTTATACGTCGATCATTTCGTGTCTTTGCAAGATGGGTAGGATGGATGAGGCGGCTTCTCTTTTTAAGGAGATGACTAGTGCTGGAATTAGACCTACTATTGTTACTTTTAATGTGCTTATTGATGGGTTTGGCAAGGTTGGCGACGTGGGTTCTATGTCGGATATGTATGAGAAAATGCTGTTCATGGGTTTTAATCCCGATGTTGTTACGTTTACCTCTCGTATTAGTGGTTATTGTCGAGTTGGATTAGTTGAAGAGGGTTTGAAGCTTTTGGAGGAAATGATTCATAGGGGCTTGCCTCCAAATGGGTATACATTTTCTATTCTGATTATTGCTTTGTGCAAGGAGAATAGAGTGAATGAGGCTTGTGAACTTTTGAAGAATTTGATATCGAGGAATATTGTTCTTCAACCGTTTATGTACAACCCTATCATTGATGGGTTATGCAAAGCTGGGCATGTCGATAAAGCTAATTTGATAGTGACTGAAATGGAGGAGAGACGATGCAAGCATGATAAATATACATTCACCATACTTATCATGGGGCATTGTATGAAGGGCAGAATGGTTGAAGCAATTAATATTTTTAATAAGATGGTACAAGTTAAATGTGCCCCAGATGACATTACTGTAAAATCTTTGATATCGTGTCTGCTTAAGGCTGGAATGCCAAAAGAAGCCTCACGAATAAAGAAGTACATTGCATTGGAGGTGGGGTTGCCTTTATCACCTTCTGGGAGAAGTGCCCCAGCCAGGACAAATATGGATATACAAGTGGCTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22739.p1 GENE.S_Transcript_22739~~S_Transcript_22739.p1 ORF type:complete len:423 (+),score=57.82,PPR_2|PF13041.2|4.1,PPR_2|PF13041.2|5.4e-18,PPR_2|PF13041.2|7.7e-09,PPR_2|PF13041.2|6.1e-18,PPR_2|PF13041.2|2.8e-12,PPR_2|PF13041.2|5.4e-18,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|3.2e-13,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|31,PPR_1|PF12854.3|12,PPR_1|PF12854.3|3e-11,PPR_1|PF12854.3|6.7e-12,PPR_1|PF12854.3|2.6e-12,PPR_1|PF12854.3|1e-05,PPR_1|PF12854.3|1.1e-10,PPR_1|PF12854.3|4.2e-09,PPR_1|PF12854.3|3.8e-07,PPR_1|PF12854.3|1.3e-08,PPR_1|PF12854.3|1.4,PPR|PF01535.16|57,PPR|PF01535.16|3.2e-07,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|2.1e-10,PPR|PF01535.16|7e-05,PPR|PF01535.16|3.5e-08,PPR|PF01535.16|0.00017,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|0.28,PPR_3|PF13812.2|8.5e+02,PPR_3|PF13812.2|0.00066,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|9e-08,PPR_3|PF13812.2|7.6,PPR_3|PF13812.2|0.0089,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|38,PPR_3|PF13812.2|81,MRP-S27|PF10037.5|1.3e-09,MRP-S27|PF10037.5|2.8,MRP-S27|PF10037.5|0.17,MRP-S27|PF10037.5|14 S_Transcript_22739:359-1627(+)
MSFWSTSFMGRLSCRRFFSTFRAVSCNIARTGSKSDIPMNVMGKNSSSIVVVVNNNKFLNTLIKRNRLDEAVTFFNEKMVSNNCIDTCSFNILIRGLCKAGQVNEAFRFFESMTNHYGLFPDVVTYNTLINGLCRVHEVSKACELLMEVRSRDDVSANVVTYTSIISCLCKMGRMDEAASLFKEMTSAGIRPTIVTFNVLIDGFGKVGDVGSMSDMYEKMLFMGFNPDVVTFTSRISGYCRVGLVEEGLKLLEEMIHRGLPPNGYTFSILIIALCKENRVNEACELLKNLISRNIVLQPFMYNPIIDGLCKAGHVDKANLIVTEMEERRCKHDKYTFTILIMGHCMKGRMVEAINIFNKMVQVKCAPDDITVKSLISCLLKAGMPKEASRIKKYIALEVGLPLSPSGRSAPARTNMDIQVAA*

Click here to download the sequence:
Link to NCBI Protein BLAST