Transcript Information: S_Transcript_227440.p1


Annotated TAIR IDAT1G49000.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18123559-18124029 | Reverse length=156
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70034213776791
Replicate 20.7257496564972
Replicate 30.60666895011844
Condition 2: 8 Hour
Replicate 13.3671668921789
Replicate 21.4718321473504
Replicate 33.9266035061808
Condition 3: 24 Hour
Replicate 11.580879726293
Replicate 20.89462414117161
Replicate 30.16593450266524


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_227440.p1 GENE.S_Transcript_227440~~S_Transcript_227440.p1 ORF type:5prime_partial len:152 (-),score=41.71 S_Transcript_227440:291-746(-)
AACATACATCAAAAAATATTCGGTGCTTTGGGAGCTTTGTCCATTTTATCTCGTGTAATGTTCTTATGTGCAACCCGCAGGAGGCTAGAAAAACAAAAACAACAACTATTCAGTAAGAGAAAACTGGCACTTGCCAAAAGGAATCTCATGTCAAGTTTCACAAAAGCAAATAGTGTTAGCAGCAAGGCTCTCTTGAAGATGATATCGTGGCGAAAACAGGTTCAACATGATGATGATGATCAAGAAGTGCGTGACCATGATTATGTTGATTATGATTATGATGAAGACGACGAGGAAGACGATGATGATGCTGTTTGGAAGAAGACTATCATCATGGGGGAAAAATGTAAGCCATTTGATTTCTCTGGCAAGATTGAGTATGATTCTGAAGGGAATCTCTTGCCTGATAAATCTAGTGATGATGATCATCAAAAGAAAAACTTGTTGGAGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_227440.p1 GENE.S_Transcript_227440~~S_Transcript_227440.p1 ORF type:5prime_partial len:152 (-),score=41.71 S_Transcript_227440:291-746(-)
NIHQKIFGALGALSILSRVMFLCATRRRLEKQKQQLFSKRKLALAKRNLMSSFTKANSVSSKALLKMISWRKQVQHDDDDQEVRDHDYVDYDYDEDDEEDDDDAVWKKTIIMGEKCKPFDFSGKIEYDSEGNLLPDKSSDDDHQKKNLLEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST