Transcript Information: S_Transcript_227570.p1


Annotated TAIR IDAT5G53920.1
Annotated Gene Nameribosomal protein L11 methyltransferase-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21892124-21894087 | Forward length=371
E-Value6E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9153296343501
Replicate 21.1699964159288
Replicate 31.5368946736334
Condition 2: 8 Hour
Replicate 13.0695637577691
Replicate 23.2201903345061
Replicate 34.1178341964169
Condition 3: 24 Hour
Replicate 10.99294924957246
Replicate 22.2320420491857
Replicate 31.241994610858


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_227570.p1 GENE.S_Transcript_227570~~S_Transcript_227570.p1 ORF type:3prime_partial len:264 (-),score=59.77,PrmA|PF06325.9|1.6e-62,Methyltransf_18|PF12847.3|1.2e-08,Methyltransf_31|PF13847.2|2.5e-06,MTS|PF05175.10|9.9e-07,MTS|PF05175.10|2.6e+03,Methyltransf_26|PF13659.2|6.7e-06,Methyltransf_23|PF13489.2|7.4e-06 S_Transcript_227570:3-791(-)
ATGGATGATCATGATGATTATGAGAACTCCGATAAGGTCAGCATTTGTTCAATATTCACTGGATGTGGGGATGTAAATTCATGCATATCACGTGCTGCAGACTCTATTGGCATGGGAATGCCAACTTTTGAACTCTTAGAGTATAATCCCTATGACTGGATAAAAAGAACTCAGGAATCATTTGATCCAGTGGAAGTAACCAAAGGCTTCTGGATTGTGCCTGAGTGGAAAGCTCCTCCTGATCCAAAGGCAACAAATATAATTCTAAATCCTGGTTTGGCTTTTGGAACGGGAGAGCATGCTACAACCAAGTTGTGTCTGTTGTTGCTACATCAAACCATTACAGGGGGTGAATTATTTCTGGACTTTGGAACAGGATCAGGAATTCTCTCAGTTGCAGCACTGAAGTTGGGTGCTGCTATGTCAGTTGGAGTTGATATTGATCCTCAAGCAATAAAAGCTGCACGTCAGAATGCTGATCTAAATAATATAGAACCTGGTAAATTAATATTAGAACTAGTTCACATGGAGGGTGGTGCTTTTTCTGTAGAAGAAGAGGCACATGAAGAACTGCATACTGAGAAGTCGGCTGGAGATAAAGTTTTCACAGACAGAGATCAATACGACATCATCATTGCAAATATCCTCTTAAATCCACTGCTGGATTTGGCAGATAAGATTGTTTCACATGCCAAAGCTGGAGCTACCGTTGGTCTCTCTGGAATATTGCACGAGCAGTCTCAAAGATGGAGGATTGGGCTTGCATTAAGGGCAGAAAGAAGACAAGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_227570.p1 GENE.S_Transcript_227570~~S_Transcript_227570.p1 ORF type:3prime_partial len:264 (-),score=59.77,PrmA|PF06325.9|1.6e-62,Methyltransf_18|PF12847.3|1.2e-08,Methyltransf_31|PF13847.2|2.5e-06,MTS|PF05175.10|9.9e-07,MTS|PF05175.10|2.6e+03,Methyltransf_26|PF13659.2|6.7e-06,Methyltransf_23|PF13489.2|7.4e-06 S_Transcript_227570:3-791(-)
MDDHDDYENSDKVSICSIFTGCGDVNSCISRAADSIGMGMPTFELLEYNPYDWIKRTQESFDPVEVTKGFWIVPEWKAPPDPKATNIILNPGLAFGTGEHATTKLCLLLLHQTITGGELFLDFGTGSGILSVAALKLGAAMSVGVDIDPQAIKAARQNADLNNIEPGKLILELVHMEGGAFSVEEEAHEELHTEKSAGDKVFTDRDQYDIIIANILLNPLLDLADKIVSHAKAGATVGLSGILHEQSQRWRIGLALRAERRQA

Click here to download the sequence:
Link to NCBI Protein BLAST