Transcript Information: S_Transcript_227624.p6


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4155851720841
Replicate 20.70413158162281
Replicate 30.78479728015322
Condition 2: 8 Hour
Replicate 10.68059756331276
Replicate 20.71399516935298
Replicate 30.68029300866962
Condition 3: 24 Hour
Replicate 10.69717713267854
Replicate 20.48220875694356
Replicate 30.80495886399307


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_227624.p6 GENE.S_Transcript_227624~~S_Transcript_227624.p6 ORF type:complete len:94 (+),score=16.03,RVT_1|PF00078.23|3.6e-08 S_Transcript_227624:2158-2439(+)
ATGGGGTGTGTGACTACCCCTTGGTATTCTCTTGGGATTAATGGAAGTGTTCATGGATATTTTAAAGGCAGGAGGGGTGTCAGGCAAGTTCACCCCCTCTCCCATTATCTCTTTGTACTAGTCATGGAGTATTTGTCTAGAATGCTAAGGGATTTGAAGCCTAGGACTGATTATGGAAGGCACCCTAAATGTGCAGCATTAAACTTAAATCACCTTTTATTTGCTGATGATCTTTTGGTGTTTGTTAGAGGAGATCAACATTCTGTTGCAGACAGTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_227624.p6 GENE.S_Transcript_227624~~S_Transcript_227624.p6 ORF type:complete len:94 (+),score=16.03,RVT_1|PF00078.23|3.6e-08 S_Transcript_227624:2158-2439(+)
MGCVTTPWYSLGINGSVHGYFKGRRGVRQVHPLSHYLFVLVMEYLSRMLRDLKPRTDYGRHPKCAALNLNHLLFADDLLVFVRGDQHSVADSL*

Click here to download the sequence:
Link to NCBI Protein BLAST