Transcript Information: S_Transcript_227629.p2


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value8E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7169678216246
Replicate 20.99638404453293
Replicate 32.1417370935794
Condition 2: 8 Hour
Replicate 10.68791581668171
Replicate 21.87634859559
Replicate 32.0628239617724
Condition 3: 24 Hour
Replicate 11.2684125897764
Replicate 20.87730883521345
Replicate 31.3017829370383


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_227629.p2 GENE.S_Transcript_227629~~S_Transcript_227629.p2 ORF type:complete len:155 (+),score=13.25,zf-RVT|PF13966.2|1.1e-13,zf-RVT|PF13966.2|1.5e+03 S_Transcript_227629:3248-3712(+)
ATGATCCCAAAGCATCAAGTTATTATGTGGATGGCTTGGAAAAGAGCCTTGCCTACTGTAGATAAGCTGTGCTCTAGGGGTATTATGTTGGCAAACAGATGTGAACTCTGCCAGGCAGCACTGGAATCACATGAGCACTTGCTCTTTCAGTGCTCTACTGCTGTTGCAATATGGGATAAAGTGCTCAGATGGCTTGGATGTACCAGACGTGGATTCAGTCTATGGAGCGAACTGAGATGGTTTGCTAAGAATATTAGAGGCAAAGGGTGGGAGAAGAAGTGTCGCAGGCTGGCTCTGAGTGCTACTATATATGAAATATGGCAAGAACGAAATTGTCGTATCTTTTCAGGACTGAGTAGACAAGTGAAGCACATTATTGCTAGTATCCAGTTTTTGGTATGTAGTAGACTTCTCTATACCTATACAGAGAATAGCCATACTATAGAGAGGAGGCTGCTTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_227629.p2 GENE.S_Transcript_227629~~S_Transcript_227629.p2 ORF type:complete len:155 (+),score=13.25,zf-RVT|PF13966.2|1.1e-13,zf-RVT|PF13966.2|1.5e+03 S_Transcript_227629:3248-3712(+)
MIPKHQVIMWMAWKRALPTVDKLCSRGIMLANRCELCQAALESHEHLLFQCSTAVAIWDKVLRWLGCTRRGFSLWSELRWFAKNIRGKGWEKKCRRLALSATIYEIWQERNCRIFSGLSRQVKHIIASIQFLVCSRLLYTYTENSHTIERRLLV*

Click here to download the sequence:
Link to NCBI Protein BLAST