Transcript Information: S_Transcript_227817.p1


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50531015003507
Replicate 21.8152928116943
Replicate 31.1672617774431
Condition 2: 8 Hour
Replicate 12.5644456710476
Replicate 22.548691617184
Replicate 32.0236564181944
Condition 3: 24 Hour
Replicate 14.0095039318179
Replicate 23.2991624446582
Replicate 31.1174323470621


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_227817.p1 GENE.S_Transcript_227817~~S_Transcript_227817.p1 ORF type:complete len:158 (+),score=16.08,Herpes_Helicase|PF02689.10|9.3e-06 S_Transcript_227817:291-764(+)
ATGCGACAAAGAGGTGGTAACTGTCGTCGTGTGGATGCGGAGTTATGCCCTGCATCTAAAAGTAGTAGCATTAAGTCGTTGGATGAGGACTGTGACACTGATGGAAGAGCAGAATCAAGTGTTCCGTGTGATGGTACTGAGATGCCAATTACTTGGCAAGGCAAAGCTCTGAAAAACCGCCGTTCTACTTCTGTTACATATCCATTCAAATTTGAGAGACGACAGTTTCCAATCAAACTTTGCTTTGCAATGACAATAAATAAATCTCAAGGCCAAACATTGACAGATGTTGCAGTCTATCTACGCAAGCAATGTTTCTCACACGGACAATTGTATGTTTCTCTATCAAGAGCTAAAAAAGCAAGCAGTGTAAAAGTATTTGTGCATTCACGCGACCAAGTGGAACGAGAGTCAACAACAGTGACGAATATCGTATCATTTGATCTGCTGAAAAGAGCTGGCCTACTATCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_227817.p1 GENE.S_Transcript_227817~~S_Transcript_227817.p1 ORF type:complete len:158 (+),score=16.08,Herpes_Helicase|PF02689.10|9.3e-06 S_Transcript_227817:291-764(+)
MRQRGGNCRRVDAELCPASKSSSIKSLDEDCDTDGRAESSVPCDGTEMPITWQGKALKNRRSTSVTYPFKFERRQFPIKLCFAMTINKSQGQTLTDVAVYLRKQCFSHGQLYVSLSRAKKASSVKVFVHSRDQVERESTTVTNIVSFDLLKRAGLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST