Transcript Information: S_Transcript_227822.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value2E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.25848957960161
Replicate 20.13558696145289
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.13735643379605
Replicate 30.45858262554757


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_227822.p1 GENE.S_Transcript_227822~~S_Transcript_227822.p1 ORF type:internal len:165 (+),score=8.25,PIF1|PF05970.10|2.6e-14 S_Transcript_227822:1-492(+)
CAATTAGTGATCGAAAAGTTCCCAGGGAAAGCAAACACTTACAAAAGTTTTGATACTACTATTGATGATGATTGCACTGCTCACCCTATTGAATTCTTAAATACTTTGTGCCCAGGAGGAATGAGTCCACATTGTCTGAGCTTAAAGGTTAACTGTCCTGTGATACTGCTTTGCAATTTAAACCCGTCTGTTAGGCTTTGTAATGGAACTAGGCTTATCTGTCGGGACTTTAAGACAAACCTTGTCATTTGTGAGATAGCAACCGGATATCGTGCTGGTGAGCTCGTTTTTATTCCACGAATTTCTCTCAGACCATCTACTTCTGTGACGTATCCATTCAAATTTGAGAGACGACAGTTTCCAATCAAACTTTGCTTTGCAATGACAATAAATAAATCTCAAGGCCAAACATTGACAGATGTTGCAGTCTATCTACGCAAGCAATGTTTCTCACACGGACAATTGTATGTTTCTCTATCAAGAGCTAAAAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_227822.p1 GENE.S_Transcript_227822~~S_Transcript_227822.p1 ORF type:internal len:165 (+),score=8.25,PIF1|PF05970.10|2.6e-14 S_Transcript_227822:1-492(+)
QLVIEKFPGKANTYKSFDTTIDDDCTAHPIEFLNTLCPGGMSPHCLSLKVNCPVILLCNLNPSVRLCNGTRLICRDFKTNLVICEIATGYRAGELVFIPRISLRPSTSVTYPFKFERRQFPIKLCFAMTINKSQGQTLTDVAVYLRKQCFSHGQLYVSLSRAKK

Click here to download the sequence:
Link to NCBI Protein BLAST