Transcript Information: S_Transcript_227863.p1


Annotated TAIR IDAT5G04020.1
Annotated Gene Namecalmodulin binding
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1081980-1086546 | Reverse length=1495
E-Value5E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53847317674295
Replicate 20.22320331848069
Replicate 30.22963718080748
Condition 2: 8 Hour
Replicate 10.82978172440206
Replicate 20.7312199555397
Replicate 31.1114099529446
Condition 3: 24 Hour
Replicate 10.42499773328004
Replicate 20.49384180866749
Replicate 30.43181710265568


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_227863.p1 GENE.S_Transcript_227863~~S_Transcript_227863.p1 ORF type:3prime_partial len:1285 (+),score=327.68,CaM_binding|PF07839.7|5.4e+03,CaM_binding|PF07839.7|1.6e+04,CaM_binding|PF07839.7|5.8e+03,CaM_binding|PF07839.7|5.6e+03,CaM_binding|PF07839.7|1.2e+04,CaM_binding|PF07839.7|3.4e+03,CaM_binding|PF07839.7|2.2e-23,CaM_binding|PF07839.7|5.1e+03,CaM_binding|PF07839.7|1.2e-15 S_Transcript_227863:507-4358(+)
ATGGCATTTAGTACATTTCCAGCACAAGAGAGATACAGCAAAAACAAGGGAGAGCGGGCAGAGCCAAGGAAGAAACTCAAGAAGTTGAGATCAGTTAAGGTTGCAAACCTGGATAAGTTGTGGTTGTCAATGAGAAGGGAGAAATCTCGGCATAACCGCGGCCGTAATGCTCCCTCAGATGATGGAACTGACCCATCAGAATCCTCTTATACTCCCATGTCAGGTTCATCATCTCTCAATTACATGAAGGCCACCACCAGCTCCAGTGCCAGAAAAGGGTCATTGCAGACAGGTTCAGGTTCAGGTTCGGGTTCAGGTTCAACTTCAGGTTCAGTTCAATCTAGTTCTGCTAGCAGTAGTGGTATCTGGACCCTGGCTAGAAAGAAAAAACCAGCTTCAGCAGAGAAGCACAACTCCAAATCCAACAGGGTCCCTGTTGAGGAATGCGCTAATCCTGCAGGTGTAAATATTCCTGTTGACATCAAATCAGGGAAAAGCTTAAAAAGGGTGTCTAGTGTGAAACGATCAAGGTGGTTTTCCAGCTTAAGATCATCAATGAGACTTGGGGCAAAGAAATTGCAGTTACCAGATGTAGCCTCCAATGAACCAGGAAGTTCAGGACTTGATGTCCCTGAATTTGATGACAGCGATGTGATTGTTGGTGGTGGAATGGAGCAGGAAGAGAACACAGAAGACCTGAATGAGAATGCTTATCATGATCAGGAGAGCATGGTCAAGGCAGGTGGAAAACAGCAATTGCAGAGATCGAGATCGATCAAGCTGACAAGACTCAGGAGCGTAAGATCATCAAGAAGAAGAGCGCAATCCAGACTTGGTGGTGGAGCAACCACACAAATGTCACGTGAGGCTGACAGCATTTCCAATGCAAAAAAACCCCATTACACGAAGGCCAATACCTCTCAAGAAGCAAGAAAGAATTCTGCAACGAGTTTGACAAGAACATCCAGTTTAAGGCGTCTAAGGATTCTAGCCAAGATTCCAAGCCTGAGATCAAGGAGTAAAGTAAAGAAACCACCTGGGGTTACTTCGCTGTCGAGTGTCAGCGTTGACCGTGCCACTTGTTCATCCACTTTAAAGAGTTCCAAGGTCCCTGACGAAGTCAAACTTCCTTCAGAGGTTCGTGATGTTTGCCCATACAGCTACTGCTCTCTCCATGGTCACCAACACCATGCTGCTTCCCCACCTCTTAAAGAAGTCATCTCTGCAAAAAGGAGAATGTTAAATAACCAAAAGGGCAAGCAGCTGGAGCATCACTGTAGGGAAGAAGTAGAACCTTTTGCAAGTGTCACAGAAGCTAATGACTCAACACATGTGGTCACGGCTGAGATTCCTGCTATCAACGAACTCACAGATGCCTGGCCCATAAATGCCCTTCAAGTTGAAGATACTGACGTAGATTTTCTTGTTAAAATCTATGCCAAACCTAGAAGAAAATGGGCTATTGAAGGCAATCGCAGTAAAGATGCTGAAGAATTAAGAGGTTCAATCAGCAACCAAACCAATGATCAAGACTCTGACTGGAAACTAGTTGAGACACTCACCGGTACATCCCAGGCAAGACAAGAGGCATTAAATGGCAAGCACCCAGAGTCATATCAGATATCCAATTTGAGCAATATTGAACCAGATGATAGAACTCAGCAGCACAAAACTAAAATTTCTGTTTCAAATTCAACTTTAGAGTTAACTGTCATTGCCCCCAAATCAGCATTAGCTGCTAAGGCGCTTCATAGCGTAGGAGGAGAAGTAATTCAGAGTTCCATCAAGGAATCCCTCCACATCCCCACTAAGGACCCTGAAGTCGGTCCTCGTGGTGATGTAATCAATATCCTCTCTGACAAACAGAAGTACACAAGTATCTGGAACCTGATCTACCAACAATTTGTATCAAGTGGCGACTCAATGACTGGAATCGAAGGAGCCAATGTTGATGAAAGAGTACAAGGTGGGGATGCAAGCAATGACCAGATGAATTTGGATCTCAAGCAGAGTAAAGAAAACAAAAATCTCAGTGAAGGGGAAGATCAACAAACTGAGGCAACGGAGAAGGTTGAATATGATCAGAATGCTGCCATAAAGTTAGTAGAAGAAGCGCTTAATGCAATTTTACAACGTGAAGAGCAGTCATCTCCCATTCCCGATAAGGAAATGCCTCATATCCATTCTGGAGAGCAAATTTTAACCCCTAAAGCTTACTCTAAAGAAAATTTTGGAAACAGTGGGAAAATAGTTGAAGAAGAGCCAAGTTACAAATCAGAAGAGAAACTGCACAATTTGGAACAAACAAATGCCTCATTGCAACAAAAAGCAGCATCAAATGAAGGGAAGATGCTGGAAAATAAAACGTCCAAGAGCTACAGCAAGCTGAGAAAACTGTTTGTGACAGCCAAATTCATCAAGGCAATGGAAAGGCTGAGAAGGATAACCCCACGCAAACCACAATATTTGTCACCAGAGTCAACTTCTGATGAAGAGCGAGTTTATCTAAGGCACCTGAGCATGAAGGGAAGGAAAGATGACGAAGAATGGATGCTTGATCATGCACTTCGGCAGGTAATTTTTAGGTTGGCTCCTGATCAGCAAAGAAGAGTGGCGCTGCTAGTTGAAGCATTTGAAAAATTTACCCCAGAGCAGATACAGAAGGGCATCAGATGCTATCCCTCAAAAACAGAACATTTACCCAACACCATGAACGAAGAGCCAAAGCTTATTGTTGAACTTGGCAAAGACATAACCATGTCTTACGAACAAGTTTCCCAAAAGCAAGATGATGGAATCCCGCCTTCTTGTGAAGGTGTTCCTCAGGAAGAAATTTCAAAGGAAGGTCACAATTGTGAGGCAGGTGCAGCAGGAAATGATGCTTCTGATGGCAAAAATCTTCCAGAGTCTGATGAAGTAGATATTTCACATTCAATTACGGAGTTATCGAGAAACAATTCACGATCAACTTCTGTTGATACAGCATATGAAGAGCCAAATCAAGCACCTGTGAAAATTCCAACCCAAGTTTCAATGAGGGATGGAGTCAGCCTTGCTGGTGATATCAATAGTATCCTCTTTGACAAACAAAAGTACACCGGTATGTGGAATCTGATCTATCAACATGTCACATCAAATGAAGTATCAGTGGATGGAGACAAGGGCGTCAATGGATCTGATGAAAAAGGGCAAGGTTTCCTGGAAATGAAGGATCTAGTACCAACACGGAGCAGTTACAACAAGATGCACAAGGAAGAGGAGGAGGATCACCAAAATGCAGCTTCTGAAAATAATGAATTCAATCAATCAGCTGCTGTTAAGCTCATAAAAGAAGCAGTTATTGCAATCCTACAACGCCATGAGCAATCATCTAATCAGCATTCTATTGGAGACCATGACAAGGCCACTAATGATGCTGCAGAACGTTGTACTTCGTCGGCTACTTATTCCAGTGGGGAAGATGCGAAAGGAGACGAGAGCCAGGACATGCATACATTATCAGAACCAACGGCTAAGCTGCATCAAGTGGAGAAGTCAAGTGATGAATTTCAGCAGCAAGCGGAACCAAATGAATCAAAGATGCCCCAGAAAAAAATATCCAAGAGCTATAGCAAGCTGAAAAAAGCGATTGTAACTGCAAAATTCATCAAGGCTATGGAGAGGCTGAGAAAGATAAATTTGCAAAAGCCACAAAATCTGCATCCAGAGGCAGCCTCAGAAGAAGAAAGGGTTTATCTGAGGCATTTAAGCATGGACAGAAGAAAAAATTATGAAGAATGGATGCTTGATTATGCACTTAGGCAGGTAATTTCCAAGCTGGATACTGATCAGCAAAGAAGAGTGGCATCACTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_227863.p1 GENE.S_Transcript_227863~~S_Transcript_227863.p1 ORF type:3prime_partial len:1285 (+),score=327.68,CaM_binding|PF07839.7|5.4e+03,CaM_binding|PF07839.7|1.6e+04,CaM_binding|PF07839.7|5.8e+03,CaM_binding|PF07839.7|5.6e+03,CaM_binding|PF07839.7|1.2e+04,CaM_binding|PF07839.7|3.4e+03,CaM_binding|PF07839.7|2.2e-23,CaM_binding|PF07839.7|5.1e+03,CaM_binding|PF07839.7|1.2e-15 S_Transcript_227863:507-4358(+)
MAFSTFPAQERYSKNKGERAEPRKKLKKLRSVKVANLDKLWLSMRREKSRHNRGRNAPSDDGTDPSESSYTPMSGSSSLNYMKATTSSSARKGSLQTGSGSGSGSGSTSGSVQSSSASSSGIWTLARKKKPASAEKHNSKSNRVPVEECANPAGVNIPVDIKSGKSLKRVSSVKRSRWFSSLRSSMRLGAKKLQLPDVASNEPGSSGLDVPEFDDSDVIVGGGMEQEENTEDLNENAYHDQESMVKAGGKQQLQRSRSIKLTRLRSVRSSRRRAQSRLGGGATTQMSREADSISNAKKPHYTKANTSQEARKNSATSLTRTSSLRRLRILAKIPSLRSRSKVKKPPGVTSLSSVSVDRATCSSTLKSSKVPDEVKLPSEVRDVCPYSYCSLHGHQHHAASPPLKEVISAKRRMLNNQKGKQLEHHCREEVEPFASVTEANDSTHVVTAEIPAINELTDAWPINALQVEDTDVDFLVKIYAKPRRKWAIEGNRSKDAEELRGSISNQTNDQDSDWKLVETLTGTSQARQEALNGKHPESYQISNLSNIEPDDRTQQHKTKISVSNSTLELTVIAPKSALAAKALHSVGGEVIQSSIKESLHIPTKDPEVGPRGDVINILSDKQKYTSIWNLIYQQFVSSGDSMTGIEGANVDERVQGGDASNDQMNLDLKQSKENKNLSEGEDQQTEATEKVEYDQNAAIKLVEEALNAILQREEQSSPIPDKEMPHIHSGEQILTPKAYSKENFGNSGKIVEEEPSYKSEEKLHNLEQTNASLQQKAASNEGKMLENKTSKSYSKLRKLFVTAKFIKAMERLRRITPRKPQYLSPESTSDEERVYLRHLSMKGRKDDEEWMLDHALRQVIFRLAPDQQRRVALLVEAFEKFTPEQIQKGIRCYPSKTEHLPNTMNEEPKLIVELGKDITMSYEQVSQKQDDGIPPSCEGVPQEEISKEGHNCEAGAAGNDASDGKNLPESDEVDISHSITELSRNNSRSTSVDTAYEEPNQAPVKIPTQVSMRDGVSLAGDINSILFDKQKYTGMWNLIYQHVTSNEVSVDGDKGVNGSDEKGQGFLEMKDLVPTRSSYNKMHKEEEEDHQNAASENNEFNQSAAVKLIKEAVIAILQRHEQSSNQHSIGDHDKATNDAAERCTSSATYSSGEDAKGDESQDMHTLSEPTAKLHQVEKSSDEFQQQAEPNESKMPQKKISKSYSKLKKAIVTAKFIKAMERLRKINLQKPQNLHPEAASEEERVYLRHLSMDRRKNYEEWMLDYALRQVISKLDTDQQRRVASL

Click here to download the sequence:
Link to NCBI Protein BLAST