Transcript Information: S_Transcript_227895.p1


Annotated TAIR IDAT1G29930.1
Annotated Gene Namechlorophyll A/B binding protein 1
Annotated Gene Symbol(s)CAB1, AB140, CAB140, LHCB1.3
Annotation TypeOrtholog
Chromosome Positionchr1:10478071-10478874 | Forward length=267
E-Value6.1E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11197.7065761367
Replicate 21291.7309940934
Replicate 31680.2258919635
Condition 2: 8 Hour
Replicate 1763.62425053405
Replicate 2704.76430943139
Replicate 3684.05377610872
Condition 3: 24 Hour
Replicate 11402.1622247821
Replicate 21409.8132653177
Replicate 31476.5837046484


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_227895.p1 GENE.S_Transcript_227895~~S_Transcript_227895.p1 ORF type:complete len:219 (+),score=49.20,Chloroa_b-bind|PF00504.17|1.2e-40 S_Transcript_227895:296-952(+)
ATGGCAACTATGGCTCTTTCATCCCAATTCATAGGGAAGGCAGTTCCCTTGAGCTCAACAGCGGAGCCATCAACAATTGCCAGAAGTAATGGCAGAATCTCAATGAGGAAGACAGCAGCAAAGCAAGCTGCTTCCTCAGGAAGCCCATGGTATGGCCCTGACCGTGTCAAATACCTTGGCCCTTTCTCTGGTGAGCCCCCATCTTACCTCACTGGTGAGTTCCCCGGTGACTATGGATGGGACACCGCAGGATTATCAGCTGACCCAGAAACCTTCGCTAAGAACAGAGAACTTGAAGTTATCCATTGCAGATGGGCCATGCTTGGGGCTTTGGGCTGCGTCTTTCCCGAGCTTCTTTCGAGGAATGGGGTCAAATTTGGGGAGGCTGTCTGGTTCAAGGCTGGTGCCCAAATCTTCAGCGAGGGTGGTCTAGACTACCTTGGCAATCCAAGCTTGATTCACGCACAAAGCATCCTGGCCATCTGGGCTTGCCAGATTATTCTCATGGGAGCTGTTGAAGGTTACCGGGTAGCAGGTGGACCTCTAGGTGAGGTCACTGACCCTCTTTACCCAGGAGGCAGCTTTGACCCACTGGGACTAGCCGATGATCCAGAAGCATTTGCTGAGTTGAAGGTGAAAGAAATAAAAAATGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_227895.p1 GENE.S_Transcript_227895~~S_Transcript_227895.p1 ORF type:complete len:219 (+),score=49.20,Chloroa_b-bind|PF00504.17|1.2e-40 S_Transcript_227895:296-952(+)
MATMALSSQFIGKAVPLSSTAEPSTIARSNGRISMRKTAAKQAASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQIILMGAVEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG*

Click here to download the sequence:
Link to NCBI Protein BLAST