Transcript Information: S_Transcript_228362.p1


Annotated TAIR IDAT5G66470.1
Annotated Gene NameRNA binding;GTP binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26541986-26544302 | Reverse length=427
E-Value6.7E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.034659048733
Replicate 210.044847278218
Replicate 311.545452670222
Condition 2: 8 Hour
Replicate 112.48315530759
Replicate 212.065034903267
Replicate 310.397974441454
Condition 3: 24 Hour
Replicate 16.7488257938421
Replicate 27.5546038587825
Replicate 38.8858151020734


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_228362.p1 GENE.S_Transcript_228362~~S_Transcript_228362.p1 ORF type:5prime_partial len:369 (-),score=97.73,MMR_HSR1|PF01926.19|1.1e-22,KH_2|PF07650.13|4.2e-14,FeoB_N|PF02421.14|5.6e-11,DUF258|PF03193.12|0.00016,DUF258|PF03193.12|0.012,ATP_bind_1|PF03029.13|3.1e+02,ATP_bind_1|PF03029.13|2.6e-05,Dynamin_N|PF00350.19|0.00073,Dynamin_N|PF00350.19|5.7 S_Transcript_228362:158-1264(-)
GAAAATTGGAGACAAGATGAAGGTGGAGATTGTACCGGCATCTTGCAAGAGGAGAGAGAACCAAGTGATTTTACGAGCTACGATTCTCATTATTACTCTTCAGATGGAGAACAGGAAGAGAATTTATCTTCTTCGTCGTCGTTTCTCTCTCTTAGCGAGAAGCCCGACAGGAACATGGCCTTGCTTGACGACTATGAGTTGGAGGAGAACGATTTTGACCCTAATTCCAATCATCGTAGCGGATATGTGGCTGTACTTGGCAAGTCAAATGTTGGGAAAAGCACTCTGTTAAACCAAATGATTGGTCAGAAGCTCTCAATTGTTACAGATAAACCTCAGACCACCAGACATCGAATCCTTGGTATATGTTCTGGCCCAGACTATCAGATGATACTTTATGATACACCTGGTGTTATTGAGAAGAAAATGCACAAACTGGACTCTATGATGATGAAGAATGTCCGAAGTGCTACCATCAATGCAGATTGTGTAGTTGTGGTGGTTGATGTCTGCAAGATGCCTGTAAAGATAGATGAAGTGCTTGAAGAAGGTATTGGAAACTTGATTGATAAGTTACCCACCTTGCTTGTTCTGAATAAGAAGGATCTCATCAAACCCGGTGAAACTGCAAAGAAACTCCAGTGGTATGAAAAGTTCACTGATGTTGATGAGGTGGTACCTGTCAGTGCTAAGTATGGCCATGGAGTTGATGATGTCAAAGAGTGGATTCTATCAAAACTTCCTACTGGCCCACCTTATTATCCAAAGGATATTGCAAGTGAGCATCCTGAAAGATTTTTCGTAGCTGAAATTGTTAGAGAGAAGATCTTTATGCAATACAAGAATGAAGTTCCGTATGCATGCCAGGTTAATGTAGTGAGTTACAAATCTAGGCCAGGTGCAAAGGATTTTATTCAAGTGGAGATTGTTGTTGAGAAGAATTCACAAAAGATTATTCTCATTGGAAAAGAGGGAAGAGCTCTAAAACTACTAGCAACTGCTGCACGCCTTGACATTGAAGATTTCTTGCAGAAGAAAGTATTTCTGGAGGTGGAAGTGAAAGTAAAAGAAAATTGGAGACAAGATGAAGGTGGAGATTGTAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_228362.p1 GENE.S_Transcript_228362~~S_Transcript_228362.p1 ORF type:5prime_partial len:369 (-),score=97.73,MMR_HSR1|PF01926.19|1.1e-22,KH_2|PF07650.13|4.2e-14,FeoB_N|PF02421.14|5.6e-11,DUF258|PF03193.12|0.00016,DUF258|PF03193.12|0.012,ATP_bind_1|PF03029.13|3.1e+02,ATP_bind_1|PF03029.13|2.6e-05,Dynamin_N|PF00350.19|0.00073,Dynamin_N|PF00350.19|5.7 S_Transcript_228362:158-1264(-)
ENWRQDEGGDCTGILQEEREPSDFTSYDSHYYSSDGEQEENLSSSSSFLSLSEKPDRNMALLDDYELEENDFDPNSNHRSGYVAVLGKSNVGKSTLLNQMIGQKLSIVTDKPQTTRHRILGICSGPDYQMILYDTPGVIEKKMHKLDSMMMKNVRSATINADCVVVVVDVCKMPVKIDEVLEEGIGNLIDKLPTLLVLNKKDLIKPGETAKKLQWYEKFTDVDEVVPVSAKYGHGVDDVKEWILSKLPTGPPYYPKDIASEHPERFFVAEIVREKIFMQYKNEVPYACQVNVVSYKSRPGAKDFIQVEIVVEKNSQKIILIGKEGRALKLLATAARLDIEDFLQKKVFLEVEVKVKENWRQDEGGDCS*

Click here to download the sequence:
Link to NCBI Protein BLAST