Transcript Information: S_Transcript_228534.p1


Annotated TAIR IDAT1G03540.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:883782-885611 | Forward length=609
E-Value2.5E-227
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8725574175469
Replicate 20.65103313448404
Replicate 30.72561584591215
Condition 2: 8 Hour
Replicate 12.4122162817741
Replicate 22.5672613193129
Replicate 32.5159688976371
Condition 3: 24 Hour
Replicate 10.50135798175134
Replicate 20.55730684204133
Replicate 30.90964750313533


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_228534.p1 GENE.S_Transcript_228534~~S_Transcript_228534.p1 ORF type:complete len:610 (+),score=105.65,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|0.5,PPR|PF01535.16|0.17,PPR|PF01535.16|0.063,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|14,PPR|PF01535.16|0.46,PPR|PF01535.16|0.00034,PPR|PF01535.16|92,PPR|PF01535.16|0.012,PPR|PF01535.16|9.5e-08,PPR|PF01535.16|5.4,PPR|PF01535.16|0.02,PPR|PF01535.16|41,PPR_2|PF13041.2|9.8e+03,PPR_2|PF13041.2|8.6,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|5.7,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|4.9e+02,PPR_2|PF13041.2|4.8e-05,PPR_2|PF13041.2|0.4,PPR_2|PF13041.2|3.1e-09,PPR_2|PF13041.2|71,PPR_2|PF13041.2|6.1,PPR_2|PF13041.2|8.2e+02,PPR_1|PF12854.3|6.2e+03,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.0024,PPR_1|PF12854.3|0.045,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|3.7,PPR_1|PF12854.3|78,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|0.14,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|5.9e+03,PPR_3|PF13812.2|27,PPR_3|PF13812.2|29,PPR_3|PF13812.2|8.9e+02,PPR_3|PF13812.2|5,PPR_3|PF13812.2|93,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|0.098,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|31,PPR_3|PF13812.2|60,PPR_3|PF13812.2|3.4e+03 S_Transcript_228534:95-1924(+)
ATGAAGCTATTCATCAAACGTAATCACACCTCTCTGGGCTCCCTCTTTCCTAAACCCTTAAAACCCAGATCATCCCAAGTATCCCAAATCCTCACTTTCTGCAAATCAGTCTCATTCTTTGAAGCTCTTAAACTTCTTAAAGTCACTGACCCAAGAACAATCAGCATAGATGTGAAGCCACTTGTATATGCTTCACTCTTACAAACAGCTACCAAAGTTCACTCCTTTAATCACGGCTTACAAATCCATTCTCATATCCTAAAATCTGGTCTCATTGCCAATAGCCTTGTCGGTAATAGCTTGTTATCCTTGTATTTCAAAGGTAGAAATTTAATTGGGGCAACTAAACTCTTTGACGAATTGACTACTAAGGATGTTATTTCTTGGACCTCCATGATATCTGGGTATGTTAGAGTGAACCCCAGCAAAGCTCTTGGTTTTTTCTGGGATATGTTGGATATTGGGATTGAGGCGAATGCCTTTTCTTTGTCATCAGGAATTAAGGCATGTTCTGAAATTGGGGATATAAAGCTTGGTCGATGCTTCCATGGGCTTGTTTTAAGAGGTGGGCTTGAGCTGAATGTTGTGATTGGTAGCTCGCTCATTGATATGTATGGGAAGAATAATTGGTTGAACTATGCACGCCATGTGTTTGATCAAATGCCTGAACCAGACTCCGTTTGTTGGTCTTCAATCATTTCAGCCTTGACAAAGAACGATCTGTATGAAGAAGCATTGGCATTCTTTTACCTGATGCAGAGGAAATATAGATTGGTCGCGGATGAGTTTACTTATGGGTCAGTATTGACAGCATGTGGGAATCTCGGGAAGTTGAAGCAAGGGAAACAAGTACATGCCCGTGTCATTGCAACGGGACTTTGTGGAAATGTAGCAGTGGAGAGTAGCTTGGTAGATATGTATGGAAAATGTGGGAAAAGTGGAGACTCGCAGCTAGTCTTTGACAAAATGAGGATAAGAAATTCGGTATCTTGGTGTGCTTTGTTAAATGGGTACAGTCAGAATGAGGAATTTGAGTCCGTTATTGAGCTTTTCAGGATGATGGATGATCCTGATCTCTTTAGTTTTGGAACTCTTATTCGAGCCTGTGCACGACTAGCTGCTGTAAAACAAGGCAAAGAGGTTCATTGTCAGTATATGAGGAAGGGTGGCCATGGATATGTTATTGTTGAATCAGCTTTAGTTGATCTCTATGCAAAATGTGGTTATATTGACTATGCTGAGAAAGTTTTTATGCAGATGCCTGTAAGAAATTTGATCTCTTGGAACTCATTGATATGTGGTTTGGCCCAGAATGGAAGAGGTCTTGAAGCTGTCAAGCTATTTGATCAAATGGTGAAAGAGAGAAATAAGCCTGATTATATTAGTTTTGTTGGCGTCATCTTTGGCTGTAGTCATGCTGGTTTGGTTGATCAGGGACGTCAATATTTTATCTCAATGACTGAAGACTATGGAATTAAACCGGGTACTGAGCATTGTAATTGCATGGTTGATCTTCTAGGCCGAGCAGGATTGATTGAAGAAGCTGAAAATCTGATAGAGAAAGCTGAGTGTAAAGATTTCTCTTCTCTCTGGCCAGCTCTTCTTGGCGCTTGTGCAACAAGCGGAAATTCTGCTGCCATGGAGCGCATTGCACTGAAAATGATGGAACTAGAACCTGAAAACCACTTAAGTTATGTGCATCTGATCAATGATTACAAATATGGTGGTCGCTGGAATGATGCTACAAAGATAAGGAAGTTGATGGAAGGTCGAAGAGTTGTTAAATTGCCTGGTAGGAGTTGGGTTGAAAATGGCCTATTAAATAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_228534.p1 GENE.S_Transcript_228534~~S_Transcript_228534.p1 ORF type:complete len:610 (+),score=105.65,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|0.5,PPR|PF01535.16|0.17,PPR|PF01535.16|0.063,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|14,PPR|PF01535.16|0.46,PPR|PF01535.16|0.00034,PPR|PF01535.16|92,PPR|PF01535.16|0.012,PPR|PF01535.16|9.5e-08,PPR|PF01535.16|5.4,PPR|PF01535.16|0.02,PPR|PF01535.16|41,PPR_2|PF13041.2|9.8e+03,PPR_2|PF13041.2|8.6,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|5.7,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|4.9e+02,PPR_2|PF13041.2|4.8e-05,PPR_2|PF13041.2|0.4,PPR_2|PF13041.2|3.1e-09,PPR_2|PF13041.2|71,PPR_2|PF13041.2|6.1,PPR_2|PF13041.2|8.2e+02,PPR_1|PF12854.3|6.2e+03,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.0024,PPR_1|PF12854.3|0.045,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|3.7,PPR_1|PF12854.3|78,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|0.14,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|5.9e+03,PPR_3|PF13812.2|27,PPR_3|PF13812.2|29,PPR_3|PF13812.2|8.9e+02,PPR_3|PF13812.2|5,PPR_3|PF13812.2|93,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|0.098,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|31,PPR_3|PF13812.2|60,PPR_3|PF13812.2|3.4e+03 S_Transcript_228534:95-1924(+)
MKLFIKRNHTSLGSLFPKPLKPRSSQVSQILTFCKSVSFFEALKLLKVTDPRTISIDVKPLVYASLLQTATKVHSFNHGLQIHSHILKSGLIANSLVGNSLLSLYFKGRNLIGATKLFDELTTKDVISWTSMISGYVRVNPSKALGFFWDMLDIGIEANAFSLSSGIKACSEIGDIKLGRCFHGLVLRGGLELNVVIGSSLIDMYGKNNWLNYARHVFDQMPEPDSVCWSSIISALTKNDLYEEALAFFYLMQRKYRLVADEFTYGSVLTACGNLGKLKQGKQVHARVIATGLCGNVAVESSLVDMYGKCGKSGDSQLVFDKMRIRNSVSWCALLNGYSQNEEFESVIELFRMMDDPDLFSFGTLIRACARLAAVKQGKEVHCQYMRKGGHGYVIVESALVDLYAKCGYIDYAEKVFMQMPVRNLISWNSLICGLAQNGRGLEAVKLFDQMVKERNKPDYISFVGVIFGCSHAGLVDQGRQYFISMTEDYGIKPGTEHCNCMVDLLGRAGLIEEAENLIEKAECKDFSSLWPALLGACATSGNSAAMERIALKMMELEPENHLSYVHLINDYKYGGRWNDATKIRKLMEGRRVVKLPGRSWVENGLLNS*

Click here to download the sequence:
Link to NCBI Protein BLAST