Transcript Information: S_Transcript_228544.p1


Annotated TAIR IDAT1G07090.1
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH6
Annotation TypeOrtholog
Chromosome Positionchr1:2174202-2174792 | Reverse length=196
E-Value7.7E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95902707153804
Replicate 20
Replicate 30.33230155105587
Condition 2: 8 Hour
Replicate 10.38424126697537
Replicate 20.20154818594348
Replicate 30.38406932621588
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_228544.p1 GENE.S_Transcript_228544~~S_Transcript_228544.p1 ORF type:complete len:111 (+),score=26.11,DUF640|PF04852.8|7.2e-06 S_Transcript_228544:221-553(+)
ATGCAAATACCTGATAATATCGAAGCTGATTATGGTATTGGTGCTAGCACTGATACTGGTACTGGATCTGGTCCTCAGTTATCAGGAGGATCTGACAGGCAGAATCCAAGCAGCAGGTATGACTCACAGAAATGGAGGGATCGGAACACCTTCTGCCAGTTCCTGAAGAACAAGGAGCCCCCAGTGGCCTTGTCGAGCTTGTCCAGGGCGGCAGTGCCCATGTCAGAGAATTCATCAAGTGCCTTGATCAGTTTGGTAAGACCAAAGTTCACATCATTAGATGTGTATTCTTTGGCATCTACCAACCCCCTGCACCCTGTTCCTGCCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_228544.p1 GENE.S_Transcript_228544~~S_Transcript_228544.p1 ORF type:complete len:111 (+),score=26.11,DUF640|PF04852.8|7.2e-06 S_Transcript_228544:221-553(+)
MQIPDNIEADYGIGASTDTGTGSGPQLSGGSDRQNPSSRYDSQKWRDRNTFCQFLKNKEPPVALSSLSRAAVPMSENSSSALISLVRPKFTSLDVYSLASTNPLHPVPAL*

Click here to download the sequence:
Link to NCBI Protein BLAST