Transcript Information: S_Transcript_228560.p1


Annotated TAIR IDAT4G33740.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37820.1); Has 138210 Blast hits to 73191 proteins in 2959 species: Archae - 732; Bacteria - 18006; Metazoa - 48521; Fungi - 16820; Plants - 7078; Viruses - 1046; Other Eukaryotes - 46007 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:16187384-16188802 | Forward length=472
E-Value7E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73246792390405
Replicate 20.91084911017263
Replicate 31.1843958952771
Condition 2: 8 Hour
Replicate 10.48911445681498
Replicate 20.51311579448914
Replicate 30
Condition 3: 24 Hour
Replicate 10.50102943785766
Replicate 20.51981219211806
Replicate 30.23139490279923


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_228560.p1 GENE.S_Transcript_228560~~S_Transcript_228560.p1 ORF type:5prime_partial len:218 (-),score=65.16 S_Transcript_228560:274-927(-)
AATATTCTTCTGGAAGAGCATCAAGGTCTGCGTGTCACAGAAGTGAAGGTTGAAGAGGATGAGGATTCCGTGAACAAAGTACAAGGAGACAAGGAAACAAAACAAACCGTGCTTAATGAGGAAAGTCCTGGCATTGAAGAAGAAGATATTGGGAAAGATGCTCATGATGTAATGGTAGAAAAAGCAGGTGATACGATCTGCATTGATGAAGAAGTTCATCATGTTACAGGAGACAAAGTAGATGATGAGGATAAATTTGAGAAAGCAAATGCTGATCCTCCTCAGCAACACAGTGATCAGGCCACTATGACTAAATCTGACAACATTGAATATGGAAAAGAACGTGAACAAAATGGGTCTAATGAAATGTATGGAACAAACTCAGTTGAGGAGAAGGAGATAGTGAATTGCATATGTGAAAAGAGCTGTAGTTATGGAAAAGGAAATCAGGAGATCATTAATGAAGCACCTCCCAGCCACAATGAAAACACTAACATCTGCATGGACAGTATCCAAGTAACTGAAGCACAGGAAGAATCAGCCCATGACAAACAGCTCAAGAACATAGAAGATGTGGGCCCAGACAACATAAATGATGGTTTCCCTGCAATAGAGGTTAGTACAGTGATAATTTTCCCTTTCTTACTCAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_228560.p1 GENE.S_Transcript_228560~~S_Transcript_228560.p1 ORF type:5prime_partial len:218 (-),score=65.16 S_Transcript_228560:274-927(-)
NILLEEHQGLRVTEVKVEEDEDSVNKVQGDKETKQTVLNEESPGIEEEDIGKDAHDVMVEKAGDTICIDEEVHHVTGDKVDDEDKFEKANADPPQQHSDQATMTKSDNIEYGKEREQNGSNEMYGTNSVEEKEIVNCICEKSCSYGKGNQEIINEAPPSHNENTNICMDSIQVTEAQEESAHDKQLKNIEDVGPDNINDGFPAIEVSTVIIFPFLLK*

Click here to download the sequence:
Link to NCBI Protein BLAST