Transcript Information: S_Transcript_228661.p1


Annotated TAIR IDAT5G48560.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19684160-19686871 | Forward length=498
E-Value1E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.886545258742
Replicate 231.874122240926
Replicate 329.108926767895
Condition 2: 8 Hour
Replicate 116.362569068215
Replicate 215.464411502115
Replicate 311.394646645981
Condition 3: 24 Hour
Replicate 19.3620929245404
Replicate 211.123022732171
Replicate 311.623061937842


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_228661.p1 GENE.S_Transcript_228661~~S_Transcript_228661.p1 ORF type:3prime_partial len:434 (-),score=123.74,HLH|PF00010.22|1.3e-06 S_Transcript_228661:1-1299(-)
ATGGAAAAGGAGCTCAATTGCCCACCATTAATGGCACCAATGGAAATCACCGCACCAGACAATCTTCAACCCAGTTATTTTAGCTCAAATTGGGACACCCCAGTTGATCAAAATGACCCCTTTGAATCAGCACTTAGCTCAATGGTTTCATCTCCTACATCCAATGTTGTTGGTGGTGATGGTATGATGATCAGAGAATTGATTGGAAGGCTTGGAAGTATTTGTGATTCTGGTGAAATCTCACCTCAATCTTGCATTGCTAATAGTACCAATACTTCTTGTTATAGTACTCCATTGAATTCCCCTCCAAAAATCAATCTTTCCCAGATTAATAACATGTTCTTGGGAGGTGGAGGGCATCATGGTAATTTCCCAACTCACCCTCCTAGTTTAGGTTCTTTCAATCCAGATCCTGGGTTTGTTGAGAGAGCTGCAAAATTTTCATGCTTTGGAAATAATAATCATAATAACAATAATAATGGTGGTGGTGGTAATAATAATGGTGATTCAAGGGAAGGATCTTCAGTTTCTGAGCAAAACCCAGGTGGTGAAATGGTAATTAAGGCTCAAAATGAGGTCACAAATTCAAGGAAGAGGAAGTCTATTCCTAAGGCTAAAGTCAAGGATTGCCCTTCTCCTGTTGCTCCTAAAGATGAGAAGGCTGAGGCAGAGAATGAAGAGTCAAATGCCAAAAGAAGCAAAGGAGATGAACAAGAGGTCAAACAGGACAATGCAGTGCAAAATGGTGGGGATTCTAATAACAACAACAACAAAGAAAAACAGAACAATATTAAGGAAGCAACAAAACCAGAACCACCAAAGGATTATATTCATGTCAGAGCTAGAAGAGGTCAAGCTACTGATAGCCATAGTCTTGCTGAAAGAGTCAGGAGAGAAAAAATCAGTGAAAGAATGAAGTTCCTTCAGGATCTTGTTCCTGGTTGCAATAAGGTGACAGGAAAAGCAACTGTACTTGATGAAATCATAAACTATGTGCAATCGTTGCAGCGCCAAGTTGAGTTCCTTTCGATGAAATTAGCAACAGTAAATCCGAGAATGGAGTTTAACATGGAAGCTCTTCTTTCCAAGGATATGTTTCAGCCTCGAGGATCATCAATGCCGCAAACAATGTATCCAATAGATCAGAACTCAGCACAGGCATTCCCTTTTGGTTACCAATCTTCCCATCAATTGCCATCATCTTTGCCAAATGATATCCCAAATGGGACTGAAAATCCCTTCTCTTTAAACCCTCTAAATGCTGCTGGAATTCGACAAAACCCGAGCATTCAAGTGCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_228661.p1 GENE.S_Transcript_228661~~S_Transcript_228661.p1 ORF type:3prime_partial len:434 (-),score=123.74,HLH|PF00010.22|1.3e-06 S_Transcript_228661:1-1299(-)
MEKELNCPPLMAPMEITAPDNLQPSYFSSNWDTPVDQNDPFESALSSMVSSPTSNVVGGDGMMIRELIGRLGSICDSGEISPQSCIANSTNTSCYSTPLNSPPKINLSQINNMFLGGGGHHGNFPTHPPSLGSFNPDPGFVERAAKFSCFGNNNHNNNNNGGGGNNNGDSREGSSVSEQNPGGEMVIKAQNEVTNSRKRKSIPKAKVKDCPSPVAPKDEKAEAENEESNAKRSKGDEQEVKQDNAVQNGGDSNNNNNKEKQNNIKEATKPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKATVLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNMEALLSKDMFQPRGSSMPQTMYPIDQNSAQAFPFGYQSSHQLPSSLPNDIPNGTENPFSLNPLNAAGIRQNPSIQVP

Click here to download the sequence:
Link to NCBI Protein BLAST