Transcript Information: S_Transcript_228662.p1


Annotated TAIR IDAT5G48560.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19684160-19686871 | Forward length=498
E-Value3E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3860938143323
Replicate 20.28727590569681
Replicate 30.24013979275522
Condition 2: 8 Hour
Replicate 11.0551625417331
Replicate 21.223460472485
Replicate 31.5542805545299
Condition 3: 24 Hour
Replicate 10.39821402196396
Replicate 20.11804068529348
Replicate 30.06568240730499


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_228662.p1 GENE.S_Transcript_228662~~S_Transcript_228662.p1 ORF type:internal len:384 (-),score=92.76,HLH|PF00010.22|1.1e-06 S_Transcript_228662:1-1149(-)
AACAATTCTTGCTATAGCACCCCATTGAATTCACCCCCAAAAGTTGCTGGGATGCCAATTATGGATCATTTAGTGAAAGAAAACTTCCCCACTTTGGGGAATTCAATTCCCTTGGGCTCAAATTTGCCTGCAATGCCAGGAGATCCTGGATTCGCGGAACGAGCGGCGAGGTTCTCTTCGTTTGGTAGTAAGAGTTTCAATGGCAGGACAAGCCAATTTGTAGCTAATAATAACAACCCAGATTATCAATATAGATCAAACTCTTCTAATTTAGGTGGGAGTCGCAAGTTACATAGAGTTTCTAGTAGCCCTTCTCTAAAGGAAGCTGGACCTCAAGCTGAAAATATTAGGAATTCCTTAGGTAACTCCATCAATGAGAGGAGAAATACAGGTACTTCTGTTCCAGATCAAGGTGAATTTTGTAGTTCTCATGAAAATTCATCAGCTTCTGGTCAAAATACCCCAAACAGGAAAAGAAAAGCAGCTCCCAAAGGCAAAACAAAGGAAAATCAAGCTCCCATCAAAGAAGATGAAAATGGGGAGGATTCCAGTGCAAAGAGAACAAAGTCAGAGGATGGAAGTGGTAAAGAAGATGCAAAAACAGAGGAAAACAGAGGAGATGAAAGCAAGAAACAGAGTAATTCTAATCAAAAGCCTCCTGAAGCTCCAAAAGATTATATTCATGTTAGAGCTAGGAGGGGTCAAGCCACTGATAGCCATAGTCTTGCTGAAAGAGTCAGGAGAGAAAAAATCAGTGAAAGAATGAAGTTCCTTCAGGATCTTGTTCCTGGTTGCAATAAGGTGACAGGAAAAGCAACTGTACTTGATGAAATCATAAACTATGTGCAATCGTTGCAGCGCCAAGTTGAGTTCCTTTCGATGAAATTAGCAACAGTAAATCCGAGAATGGAGTTTAACATGGAAGCTCTTCTTTCCAAGGATATGTTTCAGCCTCGAGGATCATCAATGCCGCAAACAATGTATCCAATAGATCAGAACTCAGCACAGGCATTCCCTTTTGGTTACCAATCTTCCCATCAATTGCCATCATCTTTGCCAAATGATATCCCAAATGGGACTGAAAATCCCTTCTCTTTAAACCCTCTAAATGCTGCTGGAATTCGACAAAACCCGAGCATTCAAGTGCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_228662.p1 GENE.S_Transcript_228662~~S_Transcript_228662.p1 ORF type:internal len:384 (-),score=92.76,HLH|PF00010.22|1.1e-06 S_Transcript_228662:1-1149(-)
NNSCYSTPLNSPPKVAGMPIMDHLVKENFPTLGNSIPLGSNLPAMPGDPGFAERAARFSSFGSKSFNGRTSQFVANNNNPDYQYRSNSSNLGGSRKLHRVSSSPSLKEAGPQAENIRNSLGNSINERRNTGTSVPDQGEFCSSHENSSASGQNTPNRKRKAAPKGKTKENQAPIKEDENGEDSSAKRTKSEDGSGKEDAKTEENRGDESKKQSNSNQKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKATVLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNMEALLSKDMFQPRGSSMPQTMYPIDQNSAQAFPFGYQSSHQLPSSLPNDIPNGTENPFSLNPLNAAGIRQNPSIQVP

Click here to download the sequence:
Link to NCBI Protein BLAST