Transcript Information: S_Transcript_228849.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value2E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.28045918929044
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_228849.p1 GENE.S_Transcript_228849~~S_Transcript_228849.p1 ORF type:complete len:236 (-),score=1.66,PIF1|PF05970.10|6.5e-24,PIF1|PF05970.10|8.6e+02,Herpes_Helicase|PF02689.10|5.5e-06 S_Transcript_228849:840-1547(-)
ATGTTGTCCTTATTGTCGGGAGATGAAAGAGTATATAGAAGTTCTAATTCAATTTGTCCTGATGATGTCAAAAAGTTTGCTCACGATCAGGTATATTCAACTGAGTACGTCAATAGTTTAAAGTGTTCAGGTTTACCTAACCATGAACCTACACTTAAAGTAGGTGCTTCAATCATGCTTCTTAGAAATATTGATTGCTCTGGTGGTTTATGTAATGGTACACGATTACGTATAACCAAGTTGGGTAACAATGTTATCGAAGCAGAGGTTCTCACTGGTAGTAGGATTGGAAAAAGGGTCTTCATACCACGATTTTCACTGACACCATCTGATATACATCTGCCGTTCAGATTTAGTAAGCGCCAATTCCCTATCAGAATTAGGTTTGCTATGACGATCAACAAAAATCAGGGACAATCTCTTCAACGGCTTGGTGTGTATTTACCTACGCCGGTATTCACGCATGGTCAACTTTATGTTGCCATATCACGAGTGACCAATAGAGAAGGCCTTAAGTTTCTTATATTAGATGATAATGGAAAGCCATGTAATAAAACCCTAAATGTAGTTTATAAAGAGGTATTGAAAAATATTTTTTCAAGTAATGTAAGTGTCATGTATTTTGTACCACTTATACATTGTAAATGTATATGGATTAAATTTAAAGTAGTTACTTTTTCAATGATAATTGATTTTTTGGGTCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_228849.p1 GENE.S_Transcript_228849~~S_Transcript_228849.p1 ORF type:complete len:236 (-),score=1.66,PIF1|PF05970.10|6.5e-24,PIF1|PF05970.10|8.6e+02,Herpes_Helicase|PF02689.10|5.5e-06 S_Transcript_228849:840-1547(-)
MLSLLSGDERVYRSSNSICPDDVKKFAHDQVYSTEYVNSLKCSGLPNHEPTLKVGASIMLLRNIDCSGGLCNGTRLRITKLGNNVIEAEVLTGSRIGKRVFIPRFSLTPSDIHLPFRFSKRQFPIRIRFAMTINKNQGQSLQRLGVYLPTPVFTHGQLYVAISRVTNREGLKFLILDDNGKPCNKTLNVVYKEVLKNIFSSNVSVMYFVPLIHCKCIWIKFKVVTFSMIIDFLGH*

Click here to download the sequence:
Link to NCBI Protein BLAST