Transcript Information: S_Transcript_228855.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value2E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.20694997674739
Condition 3: 24 Hour
Replicate 10
Replicate 20.1100185027978
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_228855.p1 GENE.S_Transcript_228855~~S_Transcript_228855.p1 ORF type:complete len:206 (-),score=-0.40,PIF1|PF05970.10|8.1e-15,PIF1|PF05970.10|6.7e+02,Herpes_Helicase|PF02689.10|4.2e-06 S_Transcript_228855:840-1457(-)
ATGAAAATAATTGAGTACCTCAATAGTTTAAGGTGTTCTGGTTTGCCTAATCATGAACTTACACTTAAAGTAGGTACCCCAATCATGCTTCTTAGAAATATTGATTGCTCTGATGATTTATGTAACAGTACAAGATTACGTGTAACCAAGCTGGGTAACAATGTTATCGAAGCAGAGGTTCTCACTGGTAGTAGGATTGGAAAAAGGGTCTTCATACCACGATTTTCACTGACACCATCTGATATACATCTGCCGTTCAGATTTAGTAAGCGCCAATTCCCTATCAGAATTAGGTTTGCTATGACGATCAACAAAAATCAGGGACAATCTCTTCAACGGCTTGGTGTGTATTTACCTACGCCGGTATTCACGCATGGTCAACTTTATGTTGCCATATCACGAGTGACCAATAGAGAAGGCCTTAAGTTTCTTATATTAGATGATAATGGAAAGCCATGTAATAAAACCCTAAATGTAGTTTATAAAGAGGTATTGAAAAATATTTTTTCAAGTAATGTAAGTGTCATGTATTTTGTACCACTTATACATTGTAAATGTATATGGATTAAATTTAAAGTAGTTACTTTTTCAATGATAATTGATTTTTTGGGTCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_228855.p1 GENE.S_Transcript_228855~~S_Transcript_228855.p1 ORF type:complete len:206 (-),score=-0.40,PIF1|PF05970.10|8.1e-15,PIF1|PF05970.10|6.7e+02,Herpes_Helicase|PF02689.10|4.2e-06 S_Transcript_228855:840-1457(-)
MKIIEYLNSLRCSGLPNHELTLKVGTPIMLLRNIDCSDDLCNSTRLRVTKLGNNVIEAEVLTGSRIGKRVFIPRFSLTPSDIHLPFRFSKRQFPIRIRFAMTINKNQGQSLQRLGVYLPTPVFTHGQLYVAISRVTNREGLKFLILDDNGKPCNKTLNVVYKEVLKNIFSSNVSVMYFVPLIHCKCIWIKFKVVTFSMIIDFLGH*

Click here to download the sequence:
Link to NCBI Protein BLAST