Transcript Information: S_Transcript_229052.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11880804122848
Replicate 20.098494596238905
Replicate 30.24700092969108
Condition 2: 8 Hour
Replicate 10.66641844741041
Replicate 20.49937162142247
Replicate 30.47580016975405
Condition 3: 24 Hour
Replicate 10.19504360259459
Replicate 20.10117773025155
Replicate 30.11259841252284


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_229052.p2 GENE.S_Transcript_229052~~S_Transcript_229052.p2 ORF type:complete len:224 (+),score=21.84,RVT_1|PF00078.23|6.7e-33 S_Transcript_229052:1398-2069(+)
ATGATTGATAATATCCTACTAGCACATGAGCTTACACAGCATTATGAGAGAGGTAACATCTCACCACGAGCTTTTATGAAAATTGATATTAAAAAAGCTTATGATACTTTGAGCCAGGACTTTGTAAAGAATACTCTGAGCACTATGGCATTCCCTGAGCAATTCATAGAGTGGATTATGATCTGTATCACTTCTTCTAGATTCTCTATTTGTGTGAATGGGAGTCCAAGGGGCTATTTTACGGGGCATTGTGGTCTTCGACAAGGGGATCCTATTTCCCCTTATATTTTTGTTTTGTGTATGGAGATGTTTTCTAGGGGGTTGAGACTTGTTGGTAATGTTAGAAACTTTTCTTTTCATCCCAAAACTGTCTGGGTGAGATTAAACCACATTATCTTTGCTGATGACCTGCTACTATTCACCAGAGGGGATGTTCCCGCAGTCACAGTTGTTCTTAATTGTCTGAATACATTCTCTAGAGCTTCTGGTTTGTACATTAATCCTAGCAAGACAAAAATTTATATGGGAGGAGTCTCTTTAGATGTTCAGAGGCAGATTTCGGACACCATAGGTTTTGTCAGAGGTACTCTCCCAGTGAGATATTTGGGTTTACCTCTAAGCTCAGCAGGAAACAAACATGATATGTGTAGAAGTATGGTTGAGAAAATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_229052.p2 GENE.S_Transcript_229052~~S_Transcript_229052.p2 ORF type:complete len:224 (+),score=21.84,RVT_1|PF00078.23|6.7e-33 S_Transcript_229052:1398-2069(+)
MIDNILLAHELTQHYERGNISPRAFMKIDIKKAYDTLSQDFVKNTLSTMAFPEQFIEWIMICITSSRFSICVNGSPRGYFTGHCGLRQGDPISPYIFVLCMEMFSRGLRLVGNVRNFSFHPKTVWVRLNHIIFADDLLLFTRGDVPAVTVVLNCLNTFSRASGLYINPSKTKIYMGGVSLDVQRQISDTIGFVRGTLPVRYLGLPLSSAGNKHDMCRSMVEKI*

Click here to download the sequence:
Link to NCBI Protein BLAST