Transcript Information: S_Transcript_229052.p3


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value9E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7603714638623
Replicate 20.21012180530967
Replicate 30.3512902111162
Condition 2: 8 Hour
Replicate 10.20309895540127
Replicate 20.42613045028051
Replicate 31.2180484345704
Condition 3: 24 Hour
Replicate 10.62413952830269
Replicate 20.43169164907328
Replicate 30.24020994671539


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_229052.p3 GENE.S_Transcript_229052~~S_Transcript_229052.p3 ORF type:3prime_partial len:105 (+),score=9.82,zf-RVT|PF13966.2|1.9e-20 S_Transcript_229052:2573-2884(+)
ATGAAAGCTTATAATATGTTCAGAGGTAAGAGTCCCAGGAGAAAATGGGCCAAAACAATCTGGGATAGTGCAAATATGCCTAAACATTCCTTTATTTCTGTTATGGCTATTTCAAATGGCCTTCCCATACAAGATAATCTTCAAAAGAGAGGTATGGAAATTGTAAGTAGATGTATGCTATGCTGTTGTCATCAAGAGACTGTTGATCATATAAATTTTGCTTGTCCTTATACAAAGTCAATATGGAGACACATCTTGAATTGGTTGCAGATAAATCGAAGGGGGTTGAGCTTAAAAGGGGAGTTGAAATGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_229052.p3 GENE.S_Transcript_229052~~S_Transcript_229052.p3 ORF type:3prime_partial len:105 (+),score=9.82,zf-RVT|PF13966.2|1.9e-20 S_Transcript_229052:2573-2884(+)
MKAYNMFRGKSPRRKWAKTIWDSANMPKHSFISVMAISNGLPIQDNLQKRGMEIVSRCMLCCCHQETVDHINFACPYTKSIWRHILNWLQINRRGLSLKGELKW

Click here to download the sequence:
Link to NCBI Protein BLAST