Transcript Information: S_Transcript_229078.p1


Annotated TAIR IDAT1G68890.1
Annotated Gene Namemagnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25896988-25906553 | Forward length=1715
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65827211535782
Replicate 21.0524652262419
Replicate 30.45618075118447
Condition 2: 8 Hour
Replicate 11.1303210415442
Replicate 20.55336728084129
Replicate 30.45192609763211
Condition 3: 24 Hour
Replicate 10.38595200513417
Replicate 21.0811358879176
Replicate 30.44561915910099


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_229078.p1 GENE.S_Transcript_229078~~S_Transcript_229078.p1 ORF type:internal len:566 (-),score=65.58 S_Transcript_229078:3-1697(-)
AAAAGAGTTCTGTGTGTGATGGGAGATGTTTCCTTTCTTCATGACACAAATGGATTGGCAATCCTCAGCTCAAGGGGTTGTTATACAGTGCTGGAAGCGTGCAGAGGCAGGAGATTCTCAATCACTCTCACAAAAGAGGAGTTCATATGGTGGTCTCGGGAGTTCATGATGATGTGGAGGAATGGCGCTGTTGAATCTCCCTTTAGAACCTGCAGGGGTCAAGGCTACACACTGCTGCTTGGCTTGTGTGTTAATGGGGCTGGAAAATACTGTTTACTGGAGCGGCAATCATGGCACGGAAAGCCCCAGTCTATTCGGATCCCGGAAGGGGTGAGAGGCCGTGGCTGGGCCTTACTGTTCGATTGGATACAAGGTGTGGGTCCCAATCACAAAATCTTGACTCCTCAGTGTAAACGGTGCGGCTCCTTCGATGTCTGGTTACCACCCTGCAATGGAGCTGGATATCATGGAAACAGGGAGCTCAGTAATGGAGGAGAAGCAGAGTCTGGAAATCGTTCTACTTGGGAAAGTGACAATGGCTATTGTACACAGGGTTTGAATTTTGATAATAAAAAATTAATTGTGGGTGGGGCTCCTCATTTGTTGAGCAACAATTCTCTACAAGGTGTCGGGCACGCCCCAAAAGCTTCAATTAACAAATCTGTTAATAGTCAACAAGTGGCTCCTCCACAAACAAAAGGTGCAATTAATAATATTGTAATAGGGGATGAGGGTGCTAAGTGGTCTGGGAATCTACAACTGATGAGGACCGGTCAAACTCCCTTAATTGAATATGGTGCGCAAAGTCACAAAATTGGGCATCAGAATAAGGGGCGAGCTTATGTGAAGCATGGACCTGGCCCACGTTTGAAACTAAAAGTGTCAACAGCCAGTGGGGCTGGGGCTTCTTTTCCACCAAGGTTTAATTCTTCTAAAAAGTATGGGCCAGGCCCAAAAGAAAAACGTGGGATTAGGCCTAGAATTCCAAATAAGTCTAATGGAGTGGGGCCTACATTTTTGGACGAAGCAGGCGCGAACAGTCACCAAATGGAGCACACACGCGAAGCAATTGAGGCACGTGACTCTTTTTTGGGAGAAAAGAGCTTGGGCCAGAAATTGACGGCCCATGGTGGTTTGAGTAACAATCAGGCTTTGTGGGGCAAAGGGCCGGTCTTCTCGAGACTGGGCTCCCAATCTATACGGGGCCCGCTTCATAGGAGTTCAAGAAGGAGCCCAGACCCCCTTAAATCAGCACGTGCTGATTTTAAATTTGGTTCTACTTCCTCTTCATTGTGCCCGAGCTCACATCACCAGATAGGGAGAACCAACCTCCCTGTCAAGCCCACTCAAGGGGGCTCTCCTGATCGCCGGCAGCTAGCCATGGTGGAAGCCCACACCGGAGTAAATTCCGATGCTCCACCGATCTCTCCCCCGGTGACAGACAACACTGGCGACTCTCTTGGACTACTCACCGACAAAGGGTGGCAGGTCTATAGACGCCGGCGACGTCACTCTACACGAGCGCAACCTGTTCTTTCTAGATGGGTGGTTCGAGTGAGGCCAGAAAACGCCGGCGAGTCTTCACGGCAGACCGTCGATGGTGGTTGCTGCGTTTCTCAACGCCGACAAGAGGTAATCTCTACACCTCAGACTGTTCCACATCCACCGGAGCCTCGAGCTACCCCAGAAAATGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_229078.p1 GENE.S_Transcript_229078~~S_Transcript_229078.p1 ORF type:internal len:566 (-),score=65.58 S_Transcript_229078:3-1697(-)
KRVLCVMGDVSFLHDTNGLAILSSRGCYTVLEACRGRRFSITLTKEEFIWWSREFMMMWRNGAVESPFRTCRGQGYTLLLGLCVNGAGKYCLLERQSWHGKPQSIRIPEGVRGRGWALLFDWIQGVGPNHKILTPQCKRCGSFDVWLPPCNGAGYHGNRELSNGGEAESGNRSTWESDNGYCTQGLNFDNKKLIVGGAPHLLSNNSLQGVGHAPKASINKSVNSQQVAPPQTKGAINNIVIGDEGAKWSGNLQLMRTGQTPLIEYGAQSHKIGHQNKGRAYVKHGPGPRLKLKVSTASGAGASFPPRFNSSKKYGPGPKEKRGIRPRIPNKSNGVGPTFLDEAGANSHQMEHTREAIEARDSFLGEKSLGQKLTAHGGLSNNQALWGKGPVFSRLGSQSIRGPLHRSSRRSPDPLKSARADFKFGSTSSSLCPSSHHQIGRTNLPVKPTQGGSPDRRQLAMVEAHTGVNSDAPPISPPVTDNTGDSLGLLTDKGWQVYRRRRRHSTRAQPVLSRWVVRVRPENAGESSRQTVDGGCCVSQRRQEVISTPQTVPHPPEPRATPENA

Click here to download the sequence:
Link to NCBI Protein BLAST