Transcript Information: S_Transcript_229173.p1


Annotated TAIR IDAT1G72500.1
Annotated Gene NameLOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: inter-alpha-trypsin inhibitor heavy chain-related (TAIR:AT1G19110.1); Has 1407 Blast hits to 1406 proteins in 307 species: Archae - 6; Bacteria - 522; Metazoa - 484; Fungi - 59; Plants - 110; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:27295336-27298556 | Reverse length=756
E-Value1E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.354854747575
Replicate 28.2234033805283
Replicate 36.0358045364511
Condition 2: 8 Hour
Replicate 12.1325390317133
Replicate 23.8642284014073
Replicate 32.1315847604981
Condition 3: 24 Hour
Replicate 15.5605157976058
Replicate 210.301732534703
Replicate 313.298896140879


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_229173.p1 GENE.S_Transcript_229173~~S_Transcript_229173.p1 ORF type:5prime_partial len:110 (-),score=16.52,VWA_3|PF13768.2|1.7e-06 S_Transcript_229173:373-702(-)
AGTGAGTGGATGAGCTTAAAGTTAGTTGCTGGGGGAGATACAGACATTTTGCTTGCTGTGAATAAGGCACTAGAGTTGGTGTCAAACCAAAGCTACTTAATGACTTTTATTTTTCTCATAACTGATGGTGCTGTTGAAAATGAAAGAGATATTTGTAAGATTGTTAAAGATTGTTGCACTAGAAAAGCTGGATTACCTTCTCTTCGTATGTCTACCTTTGGCATAGGTTCATATTGTAATCACTACTTCCTGCGACTGCTAGCACAGATTGGGAGGGGCTATTATGATGTTGCTTATGAAGCAGACTTACATGAGAGAAGTTGTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_229173.p1 GENE.S_Transcript_229173~~S_Transcript_229173.p1 ORF type:5prime_partial len:110 (-),score=16.52,VWA_3|PF13768.2|1.7e-06 S_Transcript_229173:373-702(-)
SEWMSLKLVAGGDTDILLAVNKALELVSNQSYLMTFIFLITDGAVENERDICKIVKDCCTRKAGLPSLRMSTFGIGSYCNHYFLRLLAQIGRGYYDVAYEADLHERSCG*

Click here to download the sequence:
Link to NCBI Protein BLAST