Transcript Information: S_Transcript_229286.p1


Annotated TAIR IDAT4G27660.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54150.1); Has 115 Blast hits to 109 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:13817249-13818027 | Reverse length=182
E-Value2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5911317920341
Replicate 24.1932202375394
Replicate 34.7454993431487
Condition 2: 8 Hour
Replicate 16.4849140145668
Replicate 25.8219138272973
Replicate 36.1703769382841
Condition 3: 24 Hour
Replicate 13.1298224884185
Replicate 23.1146173803752
Replicate 33.6136847247096


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_229286.p1 GENE.S_Transcript_229286~~S_Transcript_229286.p1 ORF type:complete len:342 (+),score=68.30,zf-CCHC|PF00098.19|0.00093,zf-CCHC|PF00098.19|3.8e-05,zf-CCHC|PF00098.19|6.7e+03 S_Transcript_229286:274-1299(+)
ATGGCAACATCATCATCGTCAACAACAACAGAAGAAGAGCAACAACCAGAAGAGTACGAGAGCAAAACAACAAACAAATACACAGGCAAAGTCAAGTGGCTCGACACTCAAGGCTCCGGCTCCATACTCTCCGACTACGACTCAAAAGAAGTCTTAATCACTCCATCTTCATACGGGTCTAGGACTATCCGAGAAGGGGACCGAGTCCAATTCCGGGTCATGGAGAGGAACTCAACCCCCAGTTACAAGGCAACTGATGTGATCCGGTATGGGCCCCAGTGCTATTCCTGTTCTAGGTTTGGTCATTTTGCTAATCGTTGCCCTCAAAGAAGGAATCTTGATTCTCATAAGTGTTATAGGTGTGGGTTAAAGGGTCATTATGCTAGGGATTGTAAGTCACCTCATTTCATGAATTCTGGGTTTTTGAATCTTAATACTAGTAGTAGTATTAATGGTGGTGGAAAAAAGGGGTCTTTTGTTTGTGTGAAAAGGAGGGAGGATGTTAAGAAAGTTGAGCAGGTTGAGGATTGTTTTATTCTCGACTTTGATCCTTATGATACTCTCAGTGATGATGATGACGACGATGAGGAGGAGGAGGAGGACGACGACGATGATGATTGTATAGAAATAGGGGCAATAGTGTGTGTTAAGAGAATGGAAGATGTGAAGAAAGTAGAGGAAGCGGAGGACTGTTTCATATTGGAGTTTGATCCTAGTGACCCTGTGAAATTTTCTAACTTGTCTTTGTGTGCTCCCAAAACTGAGCCTATAACTGTTGAGGAAGATGTGTCCATTTTAGCTGAGAATGGCCAGGTGGCTTGTAGGGACTATCCACATCCAAGGCATCTCTGTGCCTTACATCCTTTTAGTAAGACATTTCATGAGATCCATTGTAAATTGTGTTATTGCTATGTTTGTGATATACCTGCGCCTTGTGCGGAATGGGATCAAGGCTCAATGCATTGTGATGCTACTGATAAAAGTCTTGAGTGGAGGAGACGCAGGGACCTTAGAAAGCCGTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_229286.p1 GENE.S_Transcript_229286~~S_Transcript_229286.p1 ORF type:complete len:342 (+),score=68.30,zf-CCHC|PF00098.19|0.00093,zf-CCHC|PF00098.19|3.8e-05,zf-CCHC|PF00098.19|6.7e+03 S_Transcript_229286:274-1299(+)
MATSSSSTTTEEEQQPEEYESKTTNKYTGKVKWLDTQGSGSILSDYDSKEVLITPSSYGSRTIREGDRVQFRVMERNSTPSYKATDVIRYGPQCYSCSRFGHFANRCPQRRNLDSHKCYRCGLKGHYARDCKSPHFMNSGFLNLNTSSSINGGGKKGSFVCVKRREDVKKVEQVEDCFILDFDPYDTLSDDDDDDEEEEEDDDDDDCIEIGAIVCVKRMEDVKKVEEAEDCFILEFDPSDPVKFSNLSLCAPKTEPITVEEDVSILAENGQVACRDYPHPRHLCALHPFSKTFHEIHCKLCYCYVCDIPAPCAEWDQGSMHCDATDKSLEWRRRRDLRKPW*

Click here to download the sequence:
Link to NCBI Protein BLAST