Transcript Information: S_Transcript_22985.p1


Annotated TAIR IDAT5G03340.1
Annotated Gene NameATPase, AAA-type, CDC48 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:810091-813133 | Reverse length=810
E-Value2.5E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6532503087951
Replicate 24.9641276504408
Replicate 34.6106840209001
Condition 2: 8 Hour
Replicate 13.7319433054983
Replicate 25.8726102679282
Replicate 36.1283061864321
Condition 3: 24 Hour
Replicate 15.4612208726485
Replicate 22.8329764470434
Replicate 33.1527555506395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22985.p1 GENE.S_Transcript_22985~~S_Transcript_22985.p1 ORF type:complete len:80 (+),score=10.46,CDC48_N|PF02359.14|5.8e-06 S_Transcript_22985:625-864(+)
ATGTTGTCTTGCAAGGTAAAGAAGAGAAGAGATACAATATGCTTTCCCCTTGCTCATGATACATGTGAAGAACCAAGGATTAGGATGAACAAAGTTGTGAGATATAATTCGAGTGTCAGAGTCGGAGATGTAATTTCTTTGCACGAGTGTCTTGATCGATGTCGAATATGTGGCAAAAGGGAAAAGCGGAAGAGTGACTCTAGTATTGAGGTGACATTGATTGGAAGATTTTGCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22985.p1 GENE.S_Transcript_22985~~S_Transcript_22985.p1 ORF type:complete len:80 (+),score=10.46,CDC48_N|PF02359.14|5.8e-06 S_Transcript_22985:625-864(+)
MLSCKVKKRRDTICFPLAHDTCEEPRIRMNKVVRYNSSVRVGDVISLHECLDRCRICGKREKRKSDSSIEVTLIGRFCC*

Click here to download the sequence:
Link to NCBI Protein BLAST