Transcript Information: S_Transcript_22986.p1


Annotated TAIR IDAT3G09840.1
Annotated Gene Namecell division cycle 48
Annotated Gene Symbol(s)CDC48, ATCDC48, CDC48A
Annotation TypeOrtholog
Chromosome Positionchr3:3019494-3022832 | Forward length=809
E-Value3.2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.130217105577
Replicate 25.3163348331361
Replicate 34.888436070352
Condition 2: 8 Hour
Replicate 14.6247834422698
Replicate 25.3908069011389
Replicate 33.5954441743342
Condition 3: 24 Hour
Replicate 12.6319136735656
Replicate 26.2803333283854
Replicate 33.3426805838106


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22986.p1 GENE.S_Transcript_22986~~S_Transcript_22986.p1 ORF type:complete len:83 (+),score=6.78,CDC48_N|PF02359.14|6.4e-06 S_Transcript_22986:625-873(+)
ATGTTGTCTTGCAAGGTAAAGAAGAGAAGAGATACAATATGCTTTCCCCTTGCTCATGATACATGTGAAGAACCAAGGATTAGGATGAACAAAGTTGTGAGATATAATTCGAGTGTCAGAGTCGGAGATGTAATTTCTTTGCACGAGTGTCTTGATCGATGTCGAATATGTGGCAAAAGGGAAAAGCGGAAGAGTGACTCTAGTATTGAGCTTTGTAGAGGAACATACTTATATACACGGCTAAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22986.p1 GENE.S_Transcript_22986~~S_Transcript_22986.p1 ORF type:complete len:83 (+),score=6.78,CDC48_N|PF02359.14|6.4e-06 S_Transcript_22986:625-873(+)
MLSCKVKKRRDTICFPLAHDTCEEPRIRMNKVVRYNSSVRVGDVISLHECLDRCRICGKREKRKSDSSIELCRGTYLYTRLN*

Click here to download the sequence:
Link to NCBI Protein BLAST