Transcript Information: S_Transcript_22988.p1


Annotated TAIR IDAT3G09840.1
Annotated Gene Namecell division cycle 48
Annotated Gene Symbol(s)CDC48, ATCDC48, CDC48A
Annotation TypeOrtholog
Chromosome Positionchr3:3019494-3022832 | Forward length=809
E-Value4.6E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.512102342908
Replicate 22.0057081415923
Replicate 33.1436481960683
Condition 2: 8 Hour
Replicate 11.2116699043826
Replicate 22.5422555272417
Replicate 31.9378043277256
Condition 3: 24 Hour
Replicate 11.4894238743587
Replicate 21.5452598802055
Replicate 32.0062989867706


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22988.p1 GENE.S_Transcript_22988~~S_Transcript_22988.p1 ORF type:complete len:88 (+),score=13.63,CDC48_N|PF02359.14|7.5e-06 S_Transcript_22988:1089-1352(+)
ATGTTGTCTTGCAAGGTAAAGAAGAGAAGAGATACAATATGCTTTCCCCTTGCTCATGATACATGTGAAGAACCAAGGATTAGGATGAACAAAGTTGTGAGATATAATTCGAGTGTCAGAGTCGGAGATGTAATTTCTTTGCACGAGTGTCTTGATCGATGTCGAATATGGCTGGATGGGCTAGCAGACCAGTTCTGGTGGTCTGGGATGTTGGAAAGGGCTGCTGGTATCTCATCTCATCTCATCATTACCCCAGTGCCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22988.p1 GENE.S_Transcript_22988~~S_Transcript_22988.p1 ORF type:complete len:88 (+),score=13.63,CDC48_N|PF02359.14|7.5e-06 S_Transcript_22988:1089-1352(+)
MLSCKVKKRRDTICFPLAHDTCEEPRIRMNKVVRYNSSVRVGDVISLHECLDRCRIWLDGLADQFWWSGMLERAAGISSHLIITPVP*

Click here to download the sequence:
Link to NCBI Protein BLAST