Transcript Information: S_Transcript_229920.p1


Annotated TAIR IDAT5G60980.2
Annotated Gene NameNuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24543988-24546027 | Forward length=460
E-Value5E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.654020945512
Replicate 227.518663764796
Replicate 329.524380107803
Condition 2: 8 Hour
Replicate 134.60171791153
Replicate 232.514400409147
Replicate 327.049394466191
Condition 3: 24 Hour
Replicate 123.266459422737
Replicate 224.089517727571
Replicate 326.753969011067


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_229920.p1 GENE.S_Transcript_229920~~S_Transcript_229920.p1 ORF type:complete len:461 (-),score=113.71,NTF2|PF02136.16|2.4e-27,RRM_1|PF00076.18|1.8e-09,RRM_6|PF14259.2|1.2e-06 S_Transcript_229920:575-1957(-)
ATGGCTACTCAAGTGGATGGAACATCCTCGGACGTCAGTGCTGAAATGGTGGGACATGCCTTTGTCACTAAGTTTTACAATATCTTGCATGAGTCGCCAGATCTGGTTCATAAGTTTTACCAGGATTCAAGCACAATGAGCCGGCCTGGACCCGATGGTATTTTGAAGACAGTGACTGCCATGAAGGGCATTGATGATCTTATTCTATCCCTAGATTGCAAAGATTACAAAGCAGAGATACTGACTGCCGATGCACAGGCTTCTCATATGGAGGGGGTGATTGTCTTAGTCACTGGCTGTTTAACTGGAAAGGACAATGTGAGGAGAAAGTTCACTGAAACATTCTTCCTGGCACCTCAAGACAAAGGCTATTTTGTACTCAATGATGCATTTAGATTTGTTGAGGAAGATAGCGTGCTAGTGGATGATACAGTGGAAGAGGAGTCTGATAAAACTGCTACGCCAGCACCTCCGACACCAGTTCAGGAGATCATTAATGCCCCCGATAGTCATACTATGGCAGCAGAAAAAACTGAGGAGAAAGTAGAAGCTGATGATGTGCCCAACAGTGAGCAGAAAACAACTGTTACTGAAGTAGCTGTTCCACAAGCTCCTGCTGATTCTATTGAAAATGTTAAACCAGTTGTTGATACTTCATCTAATGGTCATGTAGATGCTCCTAAGAAGTCTTATGCATCACTTCTCAAGAATGCAAAGGAGGGTGCATCTACAACTCTGGTACGTGCTCCTGCCAGCACAGTCAAAGTTGCAACACCTAATGCAGCACAACAGCCTGCAGCTTCTCCTGCTGGACAGCAATCTCACTCAGATGCTGTGCCTACAACCATCTCTGAATCGTCTGCCCCCAATGGTAGCAATATGAATGGAACTAGCAGCGATCAGGCAGAAGACAAGGGCCATTCCATATACATTGGGGATCTGCCTTACGATGCAACAACTGAGCTGGTTGAAAAGGAATTCAAAAGGTTTGGGCGCATCAGACGCAATGGCATTCAAGTGCGATCAAATAAGGGGTATTGTTTCGGCTTTGTTGAGTATGAAGATGCCAGCGGGAAACAAAATGCTATTGAAATGGGCACACTTCGAATTGCCGGAAAAGAAGCTTTTATTCAAGAGAAGAAAACAAGTACCCGAGTTGTCAACGGTGTCAGCATGTACCCATCTGGACGAGGCAGCTTCCGCAACGACGGCTTCAGGGGTCGTGGCAGCTATGCAAACGGGCGTGGCTATGGAAGAAACGACTACAACAATAAGCGCAATGGGGACATTCCCCCACGAAGTAACCATAATGGAGATGGATACCAGGGTGTTTACCAGAATGGTGGTGGAAGACCTACTCGTCAAGGGGGTGGCAACAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_229920.p1 GENE.S_Transcript_229920~~S_Transcript_229920.p1 ORF type:complete len:461 (-),score=113.71,NTF2|PF02136.16|2.4e-27,RRM_1|PF00076.18|1.8e-09,RRM_6|PF14259.2|1.2e-06 S_Transcript_229920:575-1957(-)
MATQVDGTSSDVSAEMVGHAFVTKFYNILHESPDLVHKFYQDSSTMSRPGPDGILKTVTAMKGIDDLILSLDCKDYKAEILTADAQASHMEGVIVLVTGCLTGKDNVRRKFTETFFLAPQDKGYFVLNDAFRFVEEDSVLVDDTVEEESDKTATPAPPTPVQEIINAPDSHTMAAEKTEEKVEADDVPNSEQKTTVTEVAVPQAPADSIENVKPVVDTSSNGHVDAPKKSYASLLKNAKEGASTTLVRAPASTVKVATPNAAQQPAASPAGQQSHSDAVPTTISESSAPNGSNMNGTSSDQAEDKGHSIYIGDLPYDATTELVEKEFKRFGRIRRNGIQVRSNKGYCFGFVEYEDASGKQNAIEMGTLRIAGKEAFIQEKKTSTRVVNGVSMYPSGRGSFRNDGFRGRGSYANGRGYGRNDYNNKRNGDIPPRSNHNGDGYQGVYQNGGGRPTRQGGGNK*

Click here to download the sequence:
Link to NCBI Protein BLAST