Transcript Information: S_Transcript_230036.p1


Annotated TAIR IDAT1G31840.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:11424006-11426528 | Forward length=840
E-Value7E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.93827888970188
Replicate 20.98999696732438
Replicate 30.41377933520899
Condition 2: 8 Hour
Replicate 11.2986615898254
Replicate 21.3623882184449
Replicate 31.9812807068733
Condition 3: 24 Hour
Replicate 10.91020347877476
Replicate 20.87168506062875
Replicate 30.7275589732245


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_230036.p1 GENE.S_Transcript_230036~~S_Transcript_230036.p1 ORF type:complete len:312 (+),score=35.18,PPR_2|PF13041.2|2.9,PPR_2|PF13041.2|8.9e-07,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|4e-07,PPR_2|PF13041.2|1e-14,PPR_2|PF13041.2|9.9e-15,PPR_2|PF13041.2|3.7e-16,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|4.5e-09,PPR_1|PF12854.3|8.4e+02,PPR_1|PF12854.3|0.00017,PPR_1|PF12854.3|0.041,PPR_1|PF12854.3|5.5e-10,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|3.6e-08,PPR_1|PF12854.3|2.3e-07,PPR_1|PF12854.3|1e-08,PPR|PF01535.16|5.6,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.3,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|5e-07,PPR|PF01535.16|8.3e-06,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|3e-07,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|7.3e-05,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.0012,RPM2|PF08579.7|0.0048,RPM2|PF08579.7|42,RPM2|PF08579.7|1.3e+02 S_Transcript_230036:92-937(+)
ATGGCATTGGCGCTCTTCTTTCAATTGCTTAAGCAAGGTCTGTCTTTGGATTCCATTGCATATTGCATGCTGATTGACGCCTTTTGCAGGCAAAACAAACTCGAATCTGTATTATGGCTTTTCCAGCTAATGCTAAAGCATCAGGTGAAACCTGATATTACCTTGTACAATGTTCTCCTTAAAAGTCTGTTCAAAGATTGCCGGCTCGAAGATGCAGGAAACCTTTTCCAGCAACTTCTTAATTATGGACCAGAGCCCGATATTGTGACCTACAATACTATGATTTGTGGTTACTGTGCTTCAGAAAAGTTGAATGAGGCAATGGAGCTATATGAAACACTCTCATACAGGAAAATCAGACGCACTGTAGTCACTGCTACCATTCTGATTGATGCACTTTGTAAGAAGGGCAGACTGAGTGAGGCGGTGCTGGTATTTCGTAGGATGCTAAAAGAGGATCTTGAGCCTAGTGTTGTTACTTATAGTTGTTTAGTTGATGGGTACTTCAAATATTCTAGCATGGAAGGTGCATTTGAACTATTTGAAGAGATGAATAACAACAAAATCAAACCCACTATTGTCAGTTTTAGCATTCTAATGGATGGCCTGTGCAAAAGAGGATTAATGGAGGCGGCATTTAGCACCTTCCGTTCTGCCATTAACAGGGGTTTGTTGGCTGATATTGTAGCTTATACTATTCTTATTCATGGTTGCTGCAAAGTTAGGAGGATAAATGAAGCGAAACAGCTTTATAGACAAATGCTGGCTGAGGGTTTGATCCCTGATCCTTTGTTAAATAGAATAATTGTAGAATATAGCCTGGCTGATGAAAGCAAAACTTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_230036.p1 GENE.S_Transcript_230036~~S_Transcript_230036.p1 ORF type:complete len:312 (+),score=35.18,PPR_2|PF13041.2|2.9,PPR_2|PF13041.2|8.9e-07,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|4e-07,PPR_2|PF13041.2|1e-14,PPR_2|PF13041.2|9.9e-15,PPR_2|PF13041.2|3.7e-16,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|4.5e-09,PPR_1|PF12854.3|8.4e+02,PPR_1|PF12854.3|0.00017,PPR_1|PF12854.3|0.041,PPR_1|PF12854.3|5.5e-10,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|3.6e-08,PPR_1|PF12854.3|2.3e-07,PPR_1|PF12854.3|1e-08,PPR|PF01535.16|5.6,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.3,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|5e-07,PPR|PF01535.16|8.3e-06,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|3e-07,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|7.3e-05,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.0012,RPM2|PF08579.7|0.0048,RPM2|PF08579.7|42,RPM2|PF08579.7|1.3e+02 S_Transcript_230036:92-937(+)
MALALFFQLLKQGLSLDSIAYCMLIDAFCRQNKLESVLWLFQLMLKHQVKPDITLYNVLLKSLFKDCRLEDAGNLFQQLLNYGPEPDIVTYNTMICGYCASEKLNEAMELYETLSYRKIRRTVVTATILIDALCKKGRLSEAVLVFRRMLKEDLEPSVVTYSCLVDGYFKYSSMEGAFELFEEMNNNKIKPTIVSFSILMDGLCKRGLMEAAFSTFRSAINRGLLADIVAYTILIHGCCKVRRINEAKQLYRQMLAEGLIPDPLLNRIIVEYSLADESKTF*

Click here to download the sequence:
Link to NCBI Protein BLAST